RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	PGLYRP2	Q96PD5	576 aa		12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	CKM	P06732	381 aa		12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	CREM	Q03060	361 aa		12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	RAD51	Q06609	339 aa		12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	ENPEP	Q07075	957 aa		12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	SEPT6	Q14141	434 aa		12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	C2CD6	Q53TS8	623 aa		12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	NUGGC	Q68CJ6	796 aa		12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	ZC3H18	Q86VM9	953 aa	Known RBP	12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	SRRM1	Q8IYB3	904 aa	Known RBP	12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	TOP6BL	Q8N6T0	577 aa		12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	PAWR	Q96IZ0	340 aa	Known RBP	12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	GAN	Q9H2C0	597 aa		12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	COL11A2	P13942	1736 aa	Predicted RBP	12.92	□□□□□ -0.34
ABCB8-222	ENST00000542328	RBM47	A0AV96	593 aa	Known RBP	12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	ARHGAP42	A6NI28	874 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	CYP3A5	P20815	502 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	SLC11A2	P49281	568 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	FAM187B	Q17R55	369 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	MCOLN2	Q8IZK6	566 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	ZFP42	Q96MM3	310 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	NFKBIZ	Q9BYH8	718 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	WDCP	Q9H6R7	721 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	CATSPERB	Q9H7T0	1116 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	RRN3	Q9NYV6	651 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	TLK1	Q9UKI8	766 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	TCHH	Q07283	1943 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	RASA4B	C9J798	803 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	RASA4	O43374	803 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	RTN3	O95197	1032 aa	Predicted RBP	12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	IRF1	P10914	325 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	CYP2C18	P33260	490 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	NOP9	Q86U38	636 aa	Known RBP	12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	C18orf25	Q96B23	403 aa	Predicted RBP	12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	TRIM51	Q9BSJ1	452 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	OSBPL8	Q9BZF1	889 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328		A0A0A6YYK5	440 aa	Predicted RBP	12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	SH3BP5	O60239	455 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	IZUMO3	Q5VZ72	239 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	OTOP2	Q7RTS6	562 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	MIB1	Q86YT6	1006 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	FAM71A	Q8IYT1	594 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	EPS8L1	Q8TE68	723 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	TLR8	Q9NR97	1041 aa	Known RBP	12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	SPG21	Q9NZD8	308 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	MYH4	Q9Y623	1939 aa		12.91	□□□□□ -0.34
ABCB8-222	ENST00000542328	CCDC160	A6NGH7	325 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	EIF3E	P60228	445 aa	Known RBP	12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	IRX4	P78413	519 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	AP1B1	Q10567	949 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	TRIM32	Q13049	653 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	THOC5	Q13769	683 aa	Known RBP	12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	ZBTB41	Q5SVQ8	909 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	NPAS4	Q8IUM7	802 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	MCU	Q8NE86	351 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	ATL2	Q8NHH9	583 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	SCLY	Q96I15	445 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	CDK5RAP1	Q96SZ6	601 aa	Known RBP	12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	TUBGCP4	Q9UGJ1	667 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	CAPN6	Q9Y6Q1	641 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	IQANK1	A0A1B0GTG1	560 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	GOLGA8CP	A6NN73	597 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	KRT37	O76014	449 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	BDNF	P23560	247 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	YWHAQ	P27348	245 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	ZNF235	Q14590	738 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	RXFP2	Q8WXD0	754 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	ZIC5	Q96T25	663 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	TTC1	Q99614	292 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	TMEM161A	Q9NX61	479 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	DDX3X	O00571	662 aa	Known RBP eCLIP	12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	MBL2	P11226	248 aa	Predicted RBP	12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	ATP4A	P20648	1035 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	DMTN	Q08495	405 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	MEA1	Q16626	185 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	FAM228A	Q86W67	206 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	TRIM42	Q8IWZ5	723 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	DCLK2	Q8N568	766 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	B3GALNT2	Q8NCR0	500 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	SNF8	Q96H20	258 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	SNX27	Q96L92	541 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	TACO1	Q9BSH4	297 aa	Known RBP	12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	PACSIN1	Q9BY11	444 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328	L2HGDH	Q9H9P8	463 aa		12.9	□□□□□ -0.34
ABCB8-222	ENST00000542328		F5H423	210 aa	Predicted RBP	12.9	□□□□□ -0.35
ABCB8-222	ENST00000542328	BRCC3	P46736	316 aa		12.9	□□□□□ -0.35
ABCB8-222	ENST00000542328	ARSE	P51690	589 aa		12.9	□□□□□ -0.35
ABCB8-222	ENST00000542328	ADIG	Q0VDE8	80 aa		12.9	□□□□□ -0.35
ABCB8-222	ENST00000542328	DEPDC1B	Q8WUY9	529 aa		12.9	□□□□□ -0.35
ABCB8-222	ENST00000542328	MLXIPL	Q9NP71	852 aa		12.9	□□□□□ -0.35
ABCB8-222	ENST00000542328	SCN9A	Q15858	1988 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	IGKV6D-21	A0A0A0MT36	114 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	OR6C75	A6NL08	312 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	DFFA	O00273	331 aa		12.89	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms