RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ENOX1Q8TC92 643 aaKnown RBP10.3□□□□□ -0.76
YBX3-212ENST00000542002 MRPS31Q92665 395 aaKnown RBP10.3□□□□□ -0.76
YBX3-212ENST00000542002 JAKMIP2Q96AA8 810 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 NT5C1BQ96P26 610 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 GCNAQ96QF7 691 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 TUBGCP2Q9BSJ2 902 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 DDX23Q9BUQ8 820 aaKnown RBP10.3□□□□□ -0.76
YBX3-212ENST00000542002 HSD3B7Q9H2F3 369 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 SIX2Q9NPC8 291 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 UBE2TQ9NPD8 197 aaPredicted RBP10.3□□□□□ -0.76
YBX3-212ENST00000542002 ACP6Q9NPH0 428 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 ARHGEF3Q9NR81 526 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 TDP1Q9NUW8 608 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 FANCLQ9NW38 375 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 OSER1Q9NX31 292 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 GMIPQ9P107 970 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 NFE2L3Q9Y4A8 694 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 PCDHB4Q9Y5E5 795 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 SOBPA7XYQ1 873 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 KCNJ18B7U540 433 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 ZNF263O14978 683 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 RTN3O95197 1032 aaPredicted RBP10.29□□□□□ -0.76
YBX3-212ENST00000542002 OLFM2O95897 454 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 TBX18O95935 607 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 ABL1P00519 1130 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 OAS1P00973 400 aaKnown RBP10.29□□□□□ -0.76
YBX3-212ENST00000542002 TBXAS1P24557 533 aaPredicted RBP10.29□□□□□ -0.76
YBX3-212ENST00000542002 AVPR1AP37288 418 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 SOX9P48436 509 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 KIF11P52732 1056 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 ZNF132P52740 706 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 GCNT1Q02742 428 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 KCNJ12Q14500 433 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 NCAPHQ15003 741 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 TPD52L1Q16890 204 aaPredicted RBP10.29□□□□□ -0.76
YBX3-212ENST00000542002 VWA3BQ502W6 1294 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 PKDCCQ504Y2 493 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 TCP11X2Q5H9J9 407 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 CDKAL1Q5VV42 579 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 SNX30Q5VWJ9 437 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 TRIM68Q6AZZ1 485 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 ASTLQ6HA08 431 aaPredicted RBP10.29□□□□□ -0.76
YBX3-212ENST00000542002 CAVIN1Q6NZI2 390 aaKnown RBP10.29□□□□□ -0.76
YBX3-212ENST00000542002 TRIM65Q6PJ69 517 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 SASS6Q6UVJ0 657 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 TTC39CQ8N584 583 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 CELF5Q8N6W0 485 aaKnown RBP10.29□□□□□ -0.76
YBX3-212ENST00000542002 ANKRD52Q8NB46 1076 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 UBA3Q8TBC4 463 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 BPIFB1Q8TDL5 484 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 DEPDC1BQ8WUY9 529 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 NDRG1Q92597 394 aaKnown RBP10.29□□□□□ -0.76
YBX3-212ENST00000542002 WBP2Q969T9 261 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 E2F7Q96AV8 911 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 CHFRQ96EP1 664 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 FAM83CQ9BQN1 747 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 FOXQ1Q9C009 403 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 LINC00597Q9H2U6 94 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 NDST4Q9H3R1 872 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 FAM124BQ9H5Z6 455 aaPredicted RBP10.29□□□□□ -0.76
YBX3-212ENST00000542002 CCSER2Q9H7U1 834 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 BRD9Q9H8M2 597 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 TBC1D17Q9HA65 648 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 NMUR1Q9HB89 426 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 GKN1Q9NS71 199 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 OBP2AQ9NY56 170 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 GTSE1Q9NYZ3 720 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 TRPM5Q9NZQ8 1165 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 DACH1Q9UI36 760 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 CNTN6Q9UQ52 1028 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 USP3Q9Y6I4 520 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 DMDP11532 3685 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 ATP8B3O60423 1300 aa10.29□□□□□ -0.76
YBX3-212ENST00000542002 TRAV19A0A0A6YYK7 116 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 BECN2A8MW95 431 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 O00370 1275 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 DPYSL4O14531 572 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 CHADO15335 359 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 CYP26A1O43174 497 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 COCHO43405 550 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 USP17L7P0C7H9 530 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 AOC1P19801 751 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 PPP3CCP48454 512 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 CLCN5P51795 746 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 TYRO3Q06418 890 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 PDE4CQ08493 712 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 CETN1Q12798 172 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 ZNF268Q14587 947 aaPredicted RBP10.28□□□□□ -0.76
YBX3-212ENST00000542002 MLF2Q15773 248 aaPredicted RBP10.28□□□□□ -0.76
YBX3-212ENST00000542002 ZNF77Q15935 545 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 MAN2A1Q16706 1144 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 GOLGA7BQ2TAP0 167 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 RAB41Q5JT25 222 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 GBP6Q6ZN66 633 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 SCD5Q86SK9 330 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 PIGZQ86VD9 579 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 SH3RF2Q8TEC5 729 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 IRF7Q92985 503 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 FBXO32Q969P5 355 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 ZFRQ96KR1 1074 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms