RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 LOXL4Q96JB6 756 aa15.2■□□□□ 0.02
COPS7A-212ENST00000541866 HHIPQ96QV1 700 aa15.2■□□□□ 0.02
COPS7A-212ENST00000541866 MED10Q9BTT4 135 aa15.2■□□□□ 0.02
COPS7A-212ENST00000541866 ZNF518BQ9C0D4 1074 aa15.2■□□□□ 0.02
COPS7A-212ENST00000541866 POLR3BQ9NW08 1133 aaPredicted RBP15.2■□□□□ 0.02
COPS7A-212ENST00000541866 NME7Q9Y5B8 376 aa15.2■□□□□ 0.02
COPS7A-212ENST00000541866 ATP8B3O60423 1300 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 CLDN5O00501 218 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 SLC9A3R1O14745 358 aaPredicted RBP15.19■□□□□ 0.02
COPS7A-212ENST00000541866 YWHAQP27348 245 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 CDH8P55286 799 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 SLC7A9P82251 487 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 STK4Q13043 487 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 NCOA4Q13772 614 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 SYT13Q7L8C5 426 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 C12orf50Q8NA57 414 aaPredicted RBP15.19■□□□□ 0.02
COPS7A-212ENST00000541866 PARD3BQ8TEW8 1205 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 PAGE5Q96GU1 130 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 TNIP3Q96KP6 325 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 B3GNT5Q9BYG0 378 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 RNF38Q9H0F5 515 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 XYLT2Q9H1B5 865 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 ARRDC1-AS1Q9H2J1 176 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 SMPD4Q9NXE4 827 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 CPQQ9Y646 472 aa15.19■□□□□ 0.02
COPS7A-212ENST00000541866 ATG2BQ96BY7 2078 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 SLC30A4O14863 429 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 AKAP3O75969 853 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 RTN3O95197 1032 aaPredicted RBP15.18■□□□□ 0.02
COPS7A-212ENST00000541866 APBB3O95704 486 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 MBL2P11226 248 aaPredicted RBP15.18■□□□□ 0.02
COPS7A-212ENST00000541866 P4HA1P13674 534 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 CACNA2D1P54289 1103 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 PKP1Q13835 747 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 DMC1Q14565 340 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 KMT5BQ4FZB7 885 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 AASDHQ4L235 1098 aaPredicted RBP15.18■□□□□ 0.02
COPS7A-212ENST00000541866 FILIP1Q7Z7B0 1213 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 KBTBD6Q86V97 674 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 DDX42Q86XP3 938 aaKnown RBP eCLIP15.18■□□□□ 0.02
COPS7A-212ENST00000541866 PDZD8Q8NEN9 1154 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 CCDC47Q96A33 483 aaKnown RBP15.18■□□□□ 0.02
COPS7A-212ENST00000541866 VRTNQ9H8Y1 702 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 USP25Q9UHP3 1055 aa15.18■□□□□ 0.02
COPS7A-212ENST00000541866 SDK1Q7Z5N4 2213 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 LRRIQ3A6PVS8 624 aaPredicted RBP15.17■□□□□ 0.02
COPS7A-212ENST00000541866 ACTN4O43707 911 aaKnown RBP15.17■□□□□ 0.02
COPS7A-212ENST00000541866 C4BPAP04003 597 aaKnown RBP15.17■□□□□ 0.02
COPS7A-212ENST00000541866 CMA1P23946 247 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 RAP1GAPP47736 663 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 SEC13P55735 322 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 ZXDBP98169 803 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 SGSM1Q2NKQ1 1148 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 C2orf27AQ580R0 203 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 CEP135Q66GS9 1140 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 SCARA5Q6ZMJ2 495 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 ADGRG2Q8IZP9 1017 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 KIAA1958Q8N8K9 716 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 TSTD1Q8NFU3 115 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 PLEKHO2Q8TD55 490 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 FBXO32Q969P5 355 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 KCNK16Q96T55 309 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 NACA2Q9H009 215 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 GZF1Q9H116 711 aaPredicted RBP15.17■□□□□ 0.02
COPS7A-212ENST00000541866 SMYD3Q9H7B4 428 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 DMAC2Q9NW81 257 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 CFAP97Q9P2B7 532 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 CHORDC1Q9UHD1 332 aaPredicted RBP15.17■□□□□ 0.02
COPS7A-212ENST00000541866 FRMD4BQ9Y2L6 1034 aa15.17■□□□□ 0.02
COPS7A-212ENST00000541866 OBSL1O75147 1896 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 PDXKO00764 312 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 SCAMP3O14828 347 aaKnown RBP15.16■□□□□ 0.02
COPS7A-212ENST00000541866 KLRC4O43908 158 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 GDF9O60383 454 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 RHOBTB1O94844 696 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 KIF20AO95235 890 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 OLFM2O95897 454 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 OAS1P00973 400 aaKnown RBP15.16■□□□□ 0.02
COPS7A-212ENST00000541866 NR3C1P04150 777 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 RPN1P04843 607 aaKnown RBP15.16■□□□□ 0.02
COPS7A-212ENST00000541866 MYL1P05976 194 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 PFKFB1P16118 471 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 TRIM21P19474 475 aaKnown RBP15.16■□□□□ 0.02
COPS7A-212ENST00000541866 DGKEP52429 567 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 CLDN10P78369 228 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 DHCR24Q15392 516 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 ELF2Q15723 593 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 CCDC6Q16204 474 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 HECTD3Q5T447 861 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 IL31Q6EBC2 164 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 SLC9A9Q8IVB4 645 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 KIAA0895Q8NCT3 520 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 OVCA2Q8WZ82 227 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 EZH1Q92800 747 aaPredicted RBP15.16■□□□□ 0.02
COPS7A-212ENST00000541866 SMARCD1Q96GM5 515 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 TBC1D14Q9P2M4 693 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 EBF1Q9UH73 591 aa15.16■□□□□ 0.02
COPS7A-212ENST00000541866 K7EQS6 105 aa15.15■□□□□ 0.02
COPS7A-212ENST00000541866 CALUO43852 315 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms