RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 TUT1Q9H6E5 874 aaKnown RBP10.91□□□□□ -0.66
CHFR-219ENST00000541341 SETD4Q9NVD3 440 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 PKD2L1Q9P0L9 805 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 ANKFY1Q9P2R3 1169 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 HCN4Q9Y3Q4 1203 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 SCINQ9Y6U3 715 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 SMIM23A6NLE4 172 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 H0YCG3 227 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 NVLO15381 856 aaKnown RBP10.9□□□□□ -0.66
CHFR-219ENST00000541341 TGFB1I1O43294 461 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 ATG7O95352 703 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 HOXD8P13378 290 aaPredicted RBP10.9□□□□□ -0.66
CHFR-219ENST00000541341 FGFR4P22455 802 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 VAMP7P51809 220 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 RAD23BP54727 409 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 XIAPP98170 497 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 KRT76Q01546 638 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 CDR2Q01850 454 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 GPM6BQ13491 265 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 MESDQ14696 234 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 KRT72Q14CN4 511 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 ECM1Q16610 540 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 KLHL38Q2WGJ6 581 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 EPC2Q52LR7 807 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 PLEKHG4Q58EX7 1191 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 FAM91A1Q658Y4 838 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 NAIF1Q69YI7 327 aaPredicted RBP10.9□□□□□ -0.66
CHFR-219ENST00000541341 CWF19L1Q69YN2 538 aaKnown RBP10.9□□□□□ -0.66
CHFR-219ENST00000541341 PTCRAQ6ISU1 281 aaPredicted RBP10.9□□□□□ -0.66
CHFR-219ENST00000541341 ACAD10Q6JQN1 1059 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 ZNF746Q6NUN9 644 aaPredicted RBP10.9□□□□□ -0.66
CHFR-219ENST00000541341 RINT1Q6NUQ1 792 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 VSTM1Q6UX27 236 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 CENPUQ71F23 418 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 SERINC5Q86VE9 423 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 FAM71AQ8IYT1 594 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 ZCCHC9Q8N567 271 aaKnown RBP10.9□□□□□ -0.66
CHFR-219ENST00000541341 GLIS3Q8NEA6 775 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 RDM1Q8NG50 284 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 ALG3Q92685 438 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 ZBTB10Q96DT7 871 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 RBM41Q96IZ5 413 aaKnown RBP10.9□□□□□ -0.66
CHFR-219ENST00000541341 YME1L1Q96TA2 773 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 SIKE1Q9BRV8 207 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 TEKT3Q9BXF9 490 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 VPS11Q9H270 941 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 BHMT2Q9H2M3 363 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 FAM96AQ9H5X1 160 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 SYNCQ9H7C4 482 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 AGPAT3Q9NRZ7 376 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 SLC9A2Q9UBY0 812 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 DBR1Q9UK59 544 aaKnown RBP10.9□□□□□ -0.66
CHFR-219ENST00000541341 PHTF1Q9UMS5 762 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 AGAP1Q9UPQ3 857 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 SORCS3Q9UPU3 1222 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 DRG1Q9Y295 367 aaKnown RBP10.9□□□□□ -0.66
CHFR-219ENST00000541341 L3MBTL1Q9Y468 752 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 INSL6Q9Y581 213 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 MYH11P35749 1972 aa10.9□□□□□ -0.66
CHFR-219ENST00000541341 FNDC1Q4ZHG4 1894 aaPredicted RBP10.89□□□□□ -0.67
CHFR-219ENST00000541341 TRIOO75962 3097 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 IGKV6D-21A0A0A0MT36 114 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 EXOC1LA0A1B0GW35 172 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.89□□□□□ -0.67
CHFR-219ENST00000541341 MAP3K7O43318 606 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 GAS7O60861 476 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 EDF1O60869 148 aaKnown RBP10.89□□□□□ -0.67
CHFR-219ENST00000541341 DNAJC6O75061 913 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 SPAG6O75602 509 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 PARNO95453 639 aaKnown RBP10.89□□□□□ -0.67
CHFR-219ENST00000541341 TPBGLP0DKB5 382 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 KRT15P19012 456 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 TAC1P20366 129 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 SFNP31947 248 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 MCL1Q07820 350 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 MORF4L2Q15014 288 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 SPRED3Q2MJR0 410 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 TCEAL5Q5H9L2 206 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 POTEGQ6S5H5 508 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 MTHFD1LQ6UB35 978 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 C1orf186Q6ZWK4 172 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 ERICH1Q86X53 443 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 RHOT1Q8IXI2 618 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 ANKRD42Q8N9B4 389 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 XXYLT1Q8NBI6 393 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 MIPOL1Q8TD10 442 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 SEPT8Q92599 483 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 GFM2Q969S9 779 aaKnown RBP10.89□□□□□ -0.67
CHFR-219ENST00000541341 MCUR1Q96AQ8 359 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 EIF2AK1Q9BQI3 630 aaKnown RBP10.89□□□□□ -0.67
CHFR-219ENST00000541341 NUP85Q9BW27 656 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 TRIM55Q9BYV6 548 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 FRMD8Q9BZ67 464 aaPredicted RBP10.89□□□□□ -0.67
CHFR-219ENST00000541341 KIF9Q9HAQ2 790 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 ERVK-5Q9HDB9 667 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 JPH1Q9HDC5 661 aaPredicted RBP10.89□□□□□ -0.67
CHFR-219ENST00000541341 UBE2TQ9NPD8 197 aaPredicted RBP10.89□□□□□ -0.67
CHFR-219ENST00000541341 ZFP69BQ9UJL9 534 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 POLIQ9UNA4 740 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms