RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 PSMD2Q13200 908 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 TRIM61Q5EBN2 209 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 LRSAM1Q6UWE0 723 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 LPCAT2Q7L5N7 544 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 DPH6Q7L8W6 267 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 FILIP1Q7Z7B0 1213 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 SPATA2LQ8IUW3 424 aaPredicted RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 CSGALNACT2Q8N6G5 542 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 FSIP1Q8NA03 581 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 TXNDC5Q8NBS9 432 aaKnown RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 OR5B17Q8NGF7 314 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 WHAMMQ8TF30 809 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 RLN3Q8WXF3 142 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 ZCCHC14Q8WYQ9 949 aaKnown RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 EPSTI1Q96J88 318 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 C8orf48Q96LL4 319 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 ACCSQ96QU6 501 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 SYT15Q9BQS2 421 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 CBWD1Q9BRT8 395 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 MTMR12Q9C0I1 747 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 ZHX3Q9H4I2 956 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 PDE11AQ9HCR9 933 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 INTS13Q9NVM9 706 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 RBAKQ9NYW8 714 aaPredicted RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 STK17AQ9UEE5 414 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 KLK13Q9UKR3 277 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 CDH9Q9ULB4 789 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 KIF3AQ9Y496 699 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 SNX9Q9Y5X1 595 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 MYO18AQ92614 2054 aaKnown RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 ASH1LQ9NR48 2969 aaKnown RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 SPAARA0A1B0GVQ0 90 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 HOXC11O43248 304 aaPredicted RBP7.8□□□□□ -1.16
YBX3-209ENST00000540747 GJB3O75712 270 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 LDHAP00338 332 aaKnown RBP7.8□□□□□ -1.16
YBX3-209ENST00000540747 GAP43P17677 238 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 BDNFP23560 247 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 ITPKAP23677 461 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 GJB2P29033 226 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 GRIA2P42262 883 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 DPP6P42658 865 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 TNFRSF4P43489 277 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 PPP3CCP48454 512 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 PSMC1P62191 440 aaKnown RBP7.8□□□□□ -1.16
YBX3-209ENST00000540747 FAM193AP78312 1265 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 ACAP1Q15027 740 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 UAP1L1Q3KQV9 507 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 EMC10Q5UCC4 262 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 KIAA1211LQ6NV74 962 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 C4orf50Q6ZRC1 276 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 DENND5BQ6ZUT9 1274 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 DYMQ7RTS9 669 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 RAB44Q7Z6P3 723 aaPredicted RBP7.8□□□□□ -1.16
YBX3-209ENST00000540747 SCN4BQ8IWT1 228 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 TMEFF1Q8IYR6 380 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 KRI1Q8N9T8 703 aaKnown RBP7.8□□□□□ -1.16
YBX3-209ENST00000540747 MYCBPAPQ8TBZ2 947 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 CACTINQ8WUQ7 758 aaKnown RBP7.8□□□□□ -1.16
YBX3-209ENST00000540747 PCED1BQ96HM7 432 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 TMX3Q96JJ7 454 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 PNKPQ96T60 521 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 GZF1Q9H116 711 aaPredicted RBP7.8□□□□□ -1.16
YBX3-209ENST00000540747 TRPM5Q9NZQ8 1165 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 MAGEC2Q9UBF1 373 aaPredicted RBP7.8□□□□□ -1.16
YBX3-209ENST00000540747 EXOC7Q9UPT5 735 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 CPQQ9Y646 472 aa7.8□□□□□ -1.16
YBX3-209ENST00000540747 BPTFQ12830 3046 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 MYOFQ9NZM1 2061 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 A0A1W2PQF6 199 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 E2F8A0AVK6 867 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 GOLGA8IPA6NC78 632 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 GOLGA8JA6NMD2 632 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 F8VP50 259 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 SLC9A3R1O14745 358 aaPredicted RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 SCAMP3O14828 347 aaKnown RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 TRIM66O15016 1216 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 GREM1O60565 184 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 TACC1O75410 805 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 ALDH1A2O94788 518 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 APODP05090 189 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 SERPINF2P08697 491 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 FAM163BP0C2L3 166 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 ZDHHC11BP0C7U3 371 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 ADH5P11766 374 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 CD59P13987 128 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 GABRG2P18507 467 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 HOXD13P35453 343 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 TIE1P35590 1138 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 MAPK8P45983 427 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 SIM1P81133 766 aaPredicted RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 TAF10Q12962 218 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 RESTQ13127 1097 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 ALCAMQ13740 583 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 SF3A1Q15459 793 aaKnown RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 MAPRE1Q15691 268 aaKnown RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 C8orf34Q49A92 452 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 EOGTQ5NDL2 527 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 LY6G5CQ5SRR4 150 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 SNX30Q5VWJ9 437 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms