RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 ITPKBP27987 946 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 BRCC3P46736 316 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 CASP5P51878 434 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 AMPD3Q01432 767 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 EHHADHQ08426 723 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 PSMD2Q13200 908 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 CUL4BQ13620 913 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 CTXN3Q4LDR2 81 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 ZNF280DQ6N043 979 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 ALKAL1Q6UXT8 129 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 ZPBP2Q6X784 338 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 GAREM2Q75VX8 874 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 ARMCX6Q7L4S7 300 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 FSIP1Q8NA03 581 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 ENGASEQ8NFI3 743 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 MDGA1Q8NFP4 955 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 BEST2Q8NFU1 509 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 CD101Q93033 1021 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 PPP1R10Q96QC0 940 aaKnown RBP9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 LRRC27Q9C0I9 530 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 CDT1Q9H211 546 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 EBF3Q9H4W6 596 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 SLC27A5Q9Y2P5 690 aa9.54□□□□□ -0.88
TRAPPC1-202ENST00000540486 B8ZZF3 427 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 TISP43B9A030 160 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 H0YCG3 227 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 ERVH48-1M5A8F1 160 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 RRP8O43159 456 aaKnown RBP9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 AP5Z1O43299 807 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 CBFA2T3O75081 653 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 GADD45BO75293 160 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 TOM1L1O75674 476 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 DKK1O94907 266 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 PRAMEF12O95522 483 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 GAP43P17677 238 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 GJA4P35212 333 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 HOXD13P35453 343 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 EIF2S3P41091 472 aaKnown RBP9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 SYKP43405 635 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 ALDH1A3P47895 512 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 STRN3Q13033 797 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 CRY1Q16526 586 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 TMEM132AQ24JP5 1023 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 SEZ6Q53EL9 994 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 CC2D1AQ6P1N0 951 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 MPZL3Q6UWV2 235 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 DNAJB7Q7Z6W7 309 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 FAM181AQ8N9Y4 354 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 C3orf58Q8NDZ4 430 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 USP33Q8TEY7 942 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 WHAMMQ8TF30 809 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 EZH1Q92800 747 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 THAP11Q96EK4 314 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 PYM1Q9BRP8 204 aaKnown RBP9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 ADPGKQ9BRR6 497 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 TCHPQ9BT92 498 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 OXCT2Q9BYC2 517 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 DNAJC25Q9H1X3 360 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 MRPL44Q9H9J2 332 aaKnown RBP9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 MAGEF1Q9HAY2 307 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 FSCN3Q9NQT6 498 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 OLFML3Q9NRN5 406 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 SEL1LQ9UBV2 794 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 MMP17Q9ULZ9 603 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 GDAQ9Y2T3 454 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 YIPF1Q9Y548 306 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 PTPRQQ9UMZ3 2332 aa9.53□□□□□ -0.88
TRAPPC1-202ENST00000540486 PVALEFA0A1B0GWK0 134 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 CLDN3O15551 220 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 FAM189A1O60320 539 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 PRPF6O94906 941 aaKnown RBP9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 MCF2P10911 925 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 CPB1P15086 417 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 GABRR2P28476 465 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 ADSSP30520 456 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 GRM5P41594 1212 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 CSRP3P50461 194 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 OSTNP61366 133 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 ASIC1P78348 528 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 MCL1Q07820 350 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 PDGFRLQ15198 375 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 SLC10A6Q3KNW5 377 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 DCAF4L1Q3SXM0 396 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 ZNF568Q3ZCX4 644 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 XKR4Q5GH76 650 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 TRIM68Q6AZZ1 485 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 PCSK4Q6UW60 755 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 RNF19BQ6ZMZ0 732 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 KRBA2Q6ZNG9 492 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 UNC13DQ70J99 1090 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 ITIH5Q86UX2 942 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 CCDC65Q8IXS2 484 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 CEP57L1Q8IYX8 460 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 CMTM8Q8IZV2 173 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 FMR1NBQ8N0W7 255 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 APPL2Q8NEU8 664 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 RLN3Q8WXF3 142 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 PSMG2Q969U7 264 aa9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 ZMAT2Q96NC0 199 aaKnown RBP9.52□□□□□ -0.89
TRAPPC1-202ENST00000540486 IPO9Q96P70 1041 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms