RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 ANO7Q6IWH7 933 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 KIAA1211LQ6NV74 962 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 BLOC1S3Q6QNY0 202 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 C19orf48Q6RUI8 117 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 NYAP1Q6ZVC0 841 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 TAS1R3Q7RTX0 852 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 RAB44Q7Z6P3 723 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-219ENST00000539952 FILIP1Q7Z7B0 1213 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 DIS3L2Q8IYB7 885 aaKnown RBP6.4□□□□□ -1.38
CPSF7-219ENST00000539952 KCTD17Q8N5Z5 321 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 KIAA1958Q8N8K9 716 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 NECAB1Q8N987 351 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 FSIP1Q8NA03 581 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 GLIS3Q8NEA6 775 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 GIPC2Q8TF65 315 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 CACTINQ8WUQ7 758 aaKnown RBP6.4□□□□□ -1.38
CPSF7-219ENST00000539952 LPIN3Q9BQK8 851 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 RAB34Q9BZG1 259 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 TPSD1Q9BZJ3 242 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 ZCWPW1Q9H0M4 648 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 SMG9Q9H0W8 520 aaKnown RBP6.4□□□□□ -1.38
CPSF7-219ENST00000539952 TMEM206Q9H813 350 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 RPF1Q9H9Y2 349 aaKnown RBP6.4□□□□□ -1.38
CPSF7-219ENST00000539952 TMEM74BQ9NUR3 256 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 TFIP11Q9UBB9 837 aaKnown RBP6.4□□□□□ -1.38
CPSF7-219ENST00000539952 LRWD1Q9UFC0 647 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 TUBGCP4Q9UGJ1 667 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 PILRBQ9UKJ0 227 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 MMP17Q9ULZ9 603 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 CCL26Q9Y258 94 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 PCDHB5Q9Y5E4 795 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 ZFYVE26Q68DK2 2539 aa6.4□□□□□ -1.39
CPSF7-219ENST00000539952 URB1O60287 2271 aaKnown RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 COL4A2P08572 1712 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 LACTBL1A8MY62 500 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 CFAP99D6REC4 459 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 K7EQS6 105 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 PIRO00625 290 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 CYB561D2O14569 222 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 SLC16A4O15374 487 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 ZBTB24O43167 697 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 HIP1RO75146 1068 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 SOAT2O75908 522 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 YEATS4O95619 227 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 NFATC1O95644 943 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 OR52Z1P0C646 297 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 HARSP12081 509 aaKnown RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 TCF3P15923 654 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 HMGA1P17096 107 aaKnown RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 PFKLP17858 780 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 ATF6P18850 670 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 BCKDHBP21953 392 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 U2AF2P26368 475 aaKnown RBP eCLIP6.39□□□□□ -1.399e-9■■■□□ 15
CPSF7-219ENST00000539952 PDE6CP51160 858 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 RPL10AP62906 217 aaKnown RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 C19orf57Q0VDD7 668 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 TRIP6Q15654 476 aaKnown RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 ZNF174Q15697 407 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 ECM1Q16610 540 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 COL28A1Q2UY09 1125 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 EML3Q32P44 896 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 SEZ6Q53EL9 994 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 C2orf27AQ580R0 203 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 EOGTQ5NDL2 527 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 PEAR1Q5VY43 1037 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 LYSMD4Q5XG99 296 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 RINT1Q6NUQ1 792 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 SLC36A4Q6YBV0 504 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 CCNI2Q6ZMN8 369 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 C1orf186Q6ZWK4 172 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 BRAPQ7Z569 592 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 TMEM150AQ86TG1 271 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 ELOA2Q8IYF1 753 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 TMEFF1Q8IYR6 380 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 ADGRG2Q8IZP9 1017 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 CCAR2Q8N163 923 aaKnown RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 WHAMMQ8TF30 809 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 ADAMTS14Q8WXS8 1223 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 EZH1Q92800 747 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 MYRFLQ96LU7 910 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 C16orf45Q96MC5 204 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 TIGD1Q96MW7 591 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 PRR14Q9BWN1 585 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 LINC00597Q9H2U6 94 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 ASB7Q9H672 318 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 FAM53CQ9NYF3 392 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 KIAA1522Q9P206 1035 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 MBD1Q9UIS9 605 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 APOBEC2Q9Y235 224 aaKnown RBP6.39□□□□□ -1.39
CPSF7-219ENST00000539952 DERAQ9Y315 318 aa6.39□□□□□ -1.39
CPSF7-219ENST00000539952 THADAQ6YHU6 1953 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 TRAV19A0A0A6YYK7 116 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 SFI1A8K8P3 1242 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 E9PMD0 336 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 WNT7AO00755 349 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 SLC9A3R1O14745 358 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 IKBKBO14920 756 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 ZSCAN12O43309 604 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 CTDNEP1O95476 244 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms