RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 GDAQ9Y2T3 454 aa6.01□□□□□ -1.45
RAB3GAP1-207ENST00000539493 MYH4Q9Y623 1939 aa6.01□□□□□ -1.45
RAB3GAP1-207ENST00000539493 FAM172BPA6NC97 362 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 C2orf81A6NN90 581 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 H3BNX3 289 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 CCDC188H7C350 402 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ATMINO43313 823 aaPredicted RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 KLRC4O43908 158 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 OPHN1O60890 802 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 COBLO75128 1261 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ENTPD3O75355 529 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ARHGEF15O94989 841 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 MYCP01106 439 aaPredicted RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ZBTB48P10074 688 aaPredicted RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PRDX6P30041 224 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SLC1A4P43007 532 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GNG2P59768 71 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SRP54P61011 504 aaKnown RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 CDR2Q01850 454 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PAK1Q13153 545 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SP140Q13342 867 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 OXA1LQ15070 435 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PDK3Q15120 406 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TRADDQ15628 312 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TJAP1Q5JTD0 557 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 METTL2BQ6P1Q9 378 aaKnown RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 FRA10AC1Q70Z53 315 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 IFNL1Q8IU54 200 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SLC2A14Q8TDB8 520 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ACTRT1Q8TDG2 376 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 DCAF4Q8WV16 495 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PRPF31Q8WWY3 499 aaKnown RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 NXPE3Q969Y0 559 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 CALN1Q9BXU9 219 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 MROQ9BYG7 248 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PABPC3Q9H361 631 aaKnown RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 CUEDC2Q9H467 287 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 EHMT1Q9H9B1 1298 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 NHEJ1Q9H9Q4 299 aaPredicted RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 LRRC4CQ9HCJ2 640 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ERGIC3Q9Y282 383 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 COL2A1P02458 1487 aaPredicted RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 COL4A5P29400 1685 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 RBAK-RBAKDNI3L0D1 243 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ZNF263O14978 683 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 FKBP6O75344 327 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 FGF18O76093 207 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SEC24DO94855 1032 aaPredicted RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GAS8O95995 478 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ALOX5P09917 674 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 COL6A1P12109 1028 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SLC26A3P40879 764 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 FXR2P51116 673 aaKnown RBP eCLIP6□□□□□ -1.456e-8■■■□□ 16.9
RAB3GAP1-207ENST00000539493 ZNF135P52742 658 aaPredicted RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 IST1P53990 364 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 JAG1P78504 1218 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SMARCB1Q12824 385 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 CALCRLQ16602 461 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ABCB5Q2M3G0 1257 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 QRICH1Q2TAL8 776 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ZNF568Q3ZCX4 644 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 NANOGP8Q6NSW7 305 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ZCCHC8Q6NZY4 707 aaKnown RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 KCTD20Q7Z5Y7 419 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TTLL6Q8N841 843 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 UBLCP1Q8WVY7 318 aaPredicted RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 LRRC37BQ96QE4 947 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 CSRNP1Q96S65 589 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 YME1L1Q96TA2 773 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 HINFPQ9BQA5 517 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 HOXD1Q9GZZ0 328 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 MAGEF1Q9HAY2 307 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 MRGBPQ9NV56 204 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TAS2R7Q9NYW3 318 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 KLF15Q9UIH9 416 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GGT7Q9UJ14 662 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 DOLKQ9UPQ8 538 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SEC23IPQ9Y6Y8 1000 aaKnown RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TEX51A0A1B0GUA7 166 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SPDYE2BA6NHP3 402 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 F5H6K3 240 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SIN3BO75182 1162 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 S100BP04271 92 aaPredicted RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SPDYE6P0CI01 402 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 DRG2P55039 364 aaKnown RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 DLG4P78352 724 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 COG7P83436 770 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 FOLH1Q04609 750 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 KLRC3Q07444 240 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 RRP1BQ14684 758 aaKnown RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 C16orf72Q14CZ0 275 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 LSM12Q3MHD2 195 aaKnown RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 C6orf10Q5SRN2 563 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 RSBN1LQ6PCB5 846 aaPredicted RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 VSIG1Q86XK7 387 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GMCL1P1Q8NEA9 526 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TRUB1Q8WWH5 349 aaKnown RBP6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TRIB2Q92519 343 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 FAR2Q96K12 515 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 VPS35Q96QK1 796 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms