RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 EFHC1Q5JVL4 640 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 LILRA6Q6PI73 481 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 WDR59Q6PJI9 974 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 CLEC20AQ6ZU45 233 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 DENND5BQ6ZUT9 1274 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 ZNF571Q7Z3V5 609 aaPredicted RBP10.78□□□□□ -0.68
CLPB-210ENST00000539148 KIAA1328Q86T90 577 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 TADA2BQ86TJ2 420 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 LRRTM3Q86VH5 581 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 PHF13Q86YI8 300 aaPredicted RBP10.78□□□□□ -0.68
CLPB-210ENST00000539148 ATAD1Q8NBU5 361 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 SLC35F5Q8WV83 523 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 IRGQQ8WZA9 623 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 SECISBP2LQ93073 1101 aaKnown RBP10.78□□□□□ -0.68
CLPB-210ENST00000539148 RPGRIP1Q96KN7 1286 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 CDK5RAP1Q96SZ6 601 aaKnown RBP10.78□□□□□ -0.68
CLPB-210ENST00000539148 PRDM12Q9H4Q4 367 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 CNGB3Q9NQW8 809 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 ADAM22Q9P0K1 906 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 NAGPAQ9UK23 515 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 FBXW11Q9UKB1 542 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 INSL5Q9Y5Q6 135 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 ATG2AQ2TAZ0 1938 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 CTAGE9A4FU28 777 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 EFCAB8A8MWE9 144 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 F8VP50 259 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 RBAK-RBAKDNI3L0D1 243 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 CLDN5O00501 218 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 SOX1O00570 391 aaPredicted RBP10.77□□□□□ -0.69
CLPB-210ENST00000539148 ZMYND10O75800 440 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 LCA5LO95447 670 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 C8AP07357 584 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 GLI1P08151 1106 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 POU2F2P09086 479 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 H2AFZP0C0S5 128 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 UNGP13051 313 aaPredicted RBP10.77□□□□□ -0.69
CLPB-210ENST00000539148 IGFBP4P22692 258 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 CYP2F1P24903 491 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 NRIP1P48552 1158 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 NOMO3P69849 1222 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 KIF5AQ12840 1032 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 PDCLQ13371 301 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 CAMK1Q14012 370 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 ZNF268Q14587 947 aaPredicted RBP10.77□□□□□ -0.69
CLPB-210ENST00000539148 PKDCCQ504Y2 493 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 NAA35Q5VZE5 725 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 DENND1BQ6P3S1 775 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 RSPO2Q6UXX9 243 aaPredicted RBP10.77□□□□□ -0.69
CLPB-210ENST00000539148 H2AFVQ71UI9 128 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 TMEM110Q86TL2 294 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 PIGZQ86VD9 579 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 PASD1Q8IV76 773 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 SCML4Q8N228 414 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 EFHBQ8N7U6 833 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 CEP112Q8N8E3 955 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 STKLD1Q8NE28 680 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 MNS1Q8NEH6 495 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 SLC7A14Q8TBB6 771 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 UBA3Q8TBC4 463 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 SLC20A1Q8WUM9 679 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 OVCA2Q8WZ82 227 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 TMEM209Q96SK2 561 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 CHP1Q99653 195 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 NCAPGQ9BPX3 1015 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 ISCUQ9H1K1 167 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 SFXN1Q9H9B4 322 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 PIDD1Q9HB75 910 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 PARVAQ9NVD7 372 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 YIPF1Q9Y548 306 aa10.77□□□□□ -0.69
CLPB-210ENST00000539148 A0A087X0T9 212 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 SOWAHDA6NJG2 315 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 SOBPA7XYQ1 873 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 DDX3XO00571 662 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLPB-210ENST00000539148 ZNF197O14709 1029 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 HCRTO43612 131 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 CSPG5O95196 566 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 ZBED1O96006 694 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 FTLP02792 175 aaPredicted RBP10.76□□□□□ -0.69
CLPB-210ENST00000539148 FAM228BP0C875 321 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 PTPN2P17706 415 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 CHRNB2P17787 502 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 MMP8P22894 467 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 YWHAQP27348 245 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 IRS1P35568 1242 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 MAGEA1P43355 309 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 TKTL1P51854 596 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 GPC5P78333 572 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 CYP4A22Q5TCH4 519 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 CES5AQ6NT32 575 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 RAD9BQ6WBX8 426 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 TMEM184AQ6ZMB5 413 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 PAQR9Q6ZVX9 377 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 RBM23Q86U06 439 aaKnown RBP10.76□□□□□ -0.69
CLPB-210ENST00000539148 MON1AQ86VX9 555 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 TTC30AQ86WT1 665 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 RHOT2Q8IXI1 618 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 RNF10Q8N5U6 811 aaKnown RBP10.76□□□□□ -0.69
CLPB-210ENST00000539148 CMASQ8NFW8 434 aaPredicted RBP10.76□□□□□ -0.69
CLPB-210ENST00000539148 SLC30A5Q8TAD4 765 aa10.76□□□□□ -0.69
CLPB-210ENST00000539148 SLC22A17Q8WUG5 538 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms