RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	ARHGAP17	Q68EM7	881 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	KLHL10	Q6JEL2	608 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SYNPO	Q8N3V7	929 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	STKLD1	Q8NE28	680 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SLC2A14	Q8TDB8	520 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	EXOC4	Q96A65	974 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CYFIP2	Q96F07	1278 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	MED10	Q9BTT4	135 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CISH	Q9NSE2	258 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PIAS3	Q9Y6X2	628 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PATJ	Q8NI35	1801 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TICRR	Q7Z2Z1	1910 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FAM170B	A6NMN3	283 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	BIN1	O00499	593 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CKM	P06732	381 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ERCC5	P28715	1186 aa	Predicted RBP	13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PSEN1	P49768	467 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SLC5A3	P53794	718 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CACNA2D1	P54289	1103 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	USP46	P62068	366 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	GCNT1	Q02742	428 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TAF10	Q12962	218 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FZD5	Q13467	585 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CUL2	Q13617	745 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ITPRIPL2	Q3MIP1	535 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ZNF528	Q3MIS6	628 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ISM2	Q6H9L7	571 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	C1orf210	Q8IVY1	113 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ZMIZ2	Q8NF64	920 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FAM3C	Q92520	227 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TMEM176A	Q96HP8	235 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FAM81B	Q96LP2	452 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	IPO9	Q96P70	1041 aa	Known RBP	13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TWNK	Q96RR1	684 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	KCNK16	Q96T55	309 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SMO	Q99835	787 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SRRT	Q9BXP5	876 aa	Known RBP	13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	DUSP16	Q9BY84	665 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SEMA4A	Q9H3S1	761 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	MMRN2	Q9H8L6	949 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	KRT82	Q9NSB4	513 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	LMBRD1	Q9NUN5	540 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	HMGXB4	Q9UGU5	601 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	DACH1	Q9UI36	760 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FBXO4	Q9UKT5	387 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CTNND2	Q9UQB3	1225 aa		13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	HELZ	P42694	1942 aa	Known RBP	13.03	□□□□□ -0.32
CLTCL1-205	ENST00000538828	GTPBP10	A4D1E9	387 aa	Known RBP	13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	GOLGA6L22	H0YM25	854 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SLC9A3R1	O14745	358 aa	Predicted RBP	13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TARS	P26639	723 aa	Known RBP	13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	HOXD11	P31277	338 aa	Predicted RBP	13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CTH	P32929	405 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	NBL1	P41271	181 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	RAD23B	P54727	409 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SLC8A3	P57103	927 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	KCNH2	Q12809	1159 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	RUNX3	Q13761	415 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	MTF1	Q14872	753 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	UBXN2B	Q14CS0	331 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CAMK4	Q16566	473 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	DGKK	Q5KSL6	1271 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	KLHDC10	Q6PID8	442 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CLEC20A	Q6ZU45	233 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	UBR7	Q8N806	425 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	C12orf29	Q8N999	325 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SLC4A11	Q8NBS3	891 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	LMO3	Q8TAP4	145 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	OSCP1	Q8WVF1	389 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TATDN2	Q93075	761 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	FBXO32	Q969P5	355 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	OTUB2	Q96DC9	234 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	NT5C1B	Q96P26	610 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	FOXQ1	Q9C009	403 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	NUP62CL	Q9H1M0	184 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CHRD	Q9H2X0	955 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	GKN1	Q9NS71	199 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SCML2	Q9UQR0	700 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CCL26	Q9Y258	94 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	USP3	Q9Y6I4	520 aa		13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	RIF1	Q5UIP0	2472 aa	Known RBP	13.02	□□□□□ -0.33
CLTCL1-205	ENST00000538828	FANCM	Q8IYD8	2048 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	C2orf78	A6NCI8	922 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	HHLA1	C9JL84	531 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SPECC1L-ADORA2A	F8WAN1	911 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	LRRN2	O75325	713 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	AFP	P02771	609 aa	Known RBP	13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PAEP	P09466	180 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CCDC130	P13994	396 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CDR1	P51861	262 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	KPNA1	P52294	538 aa	Predicted RBP	13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	KIF11	P52732	1056 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	NR1H3	Q13133	447 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	LRRC32	Q14392	662 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ANGPT1	Q15389	498 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	STIL	Q15468	1287 aa		13.01	□□□□□ -0.33

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