RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 DESP17661 470 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 RPL22P35268 128 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 TEX44Q53QW1 395 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 WDR44Q5JSH3 913 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 KLC3Q6P597 504 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 HHIPL2Q6UWX4 724 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 B3GNT6Q6ZMB0 384 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 C15orf39Q6ZRI6 1047 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 TMEM161BQ8NDZ6 487 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 SLC26A7Q8TE54 656 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 IRGQQ8WZA9 623 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 MECRQ9BV79 373 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 GNA15P30679 374 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 RPL5P46777 297 aaKnown RBP19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 IRX4P78413 519 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 HPCAP84074 193 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 ZNF252P-AS1Q0IIN9 211 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 BRDTQ58F21 947 aaPredicted RBP19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 TATDN1Q6P1N9 297 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 RILPQ96NA2 401 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 FRMD8P1Q9BZ68 369 aaPredicted RBP19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 PI4KBQ9UBF8 816 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 C15orf38-AP3S2A0A0A6YYH1 394 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 MEI4A8MW99 385 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 F8VP50 259 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 SPAG6O75602 509 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 SMIM18P0DKX4 95 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 UBAP2LQ14157 1087 aaKnown RBP19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 CHI3L2Q15782 390 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 TXNRD3NBQ6F5E7 133 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 ARPINQ7Z6K5 226 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 RAB3IL1Q8TBN0 382 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 ACTL9Q8TC94 416 aa19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 ACSF2Q96CM8 615 aaPredicted RBP19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 MARCOQ9UEW3 520 aaPredicted RBP19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 HBS1LQ9Y450 684 aaKnown RBP19.37■□□□□ 0.69
SFSWAP-207ENST00000538548 TTC36A6NLP5 189 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 VILLO15195 856 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 PEX1O43933 1283 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 PGM3O95394 542 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 ACO1P21399 889 aaKnown RBP19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 ELK3P41970 407 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 QARSP47897 775 aaKnown RBP19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 OTUD4Q01804 1114 aaKnown RBP19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 TTC39BQ5VTQ0 682 aaPredicted RBP19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 PLA2G4FQ68DD2 849 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 SLC26A11Q86WA9 606 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 IGDCC3Q8IVU1 814 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 SHKBP1Q8TBC3 707 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 RSAD2Q8WXG1 361 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 TEKT1Q969V4 418 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 SH2D3AQ9BRG2 576 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 SDR42E2A6NKP2 422 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 TRIM49D1C9J1S8 452 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 LYPLA2O95372 231 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 C6orf222P0C671 652 aaPredicted RBP19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 KITP10721 976 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 YWHABP31946 246 aaKnown RBP19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 SLC25A3Q00325 362 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 WASHC5Q12768 1159 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 CCNIQ14094 377 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 CRY2Q49AN0 593 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 CES4AQ5XG92 561 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 CATSPER2Q96P56 530 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 MXRA8Q9BRK3 442 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 EFR3BQ9Y2G0 817 aa19.36■□□□□ 0.69
SFSWAP-207ENST00000538548 DDTLA6NHG4 134 aaPredicted RBP19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 KBTBD13C9JR72 458 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 CASQ2O14958 399 aaPredicted RBP19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 SNNO75324 88 aaPredicted RBP19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 GDF11O95390 407 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 MMP8P22894 467 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 SSTR3P32745 418 aaPredicted RBP19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 TRIP10Q15642 601 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 ABCB5Q2M3G0 1257 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 FAM102BQ5T8I3 360 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 SLC39A4Q6P5W5 647 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 GPD1LQ8N335 351 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 TTC13Q8NBP0 860 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 ICA1LQ8NDH6 482 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 FAM84AQ96KN4 292 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 COA1Q9GZY4 146 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 C10orf88Q9H8K7 445 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 SAE1Q9UBE0 346 aaPredicted RBP19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 ZNF510Q9Y2H8 683 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 TXNDC9O14530 226 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 KRT37O76014 449 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 STAT2P52630 851 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 FOLH1Q04609 750 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 FBXL19Q6PCT2 694 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 TMEM270Q6UE05 265 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 RBM44Q6ZP01 1051 aaKnown RBP19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 NUDCD3Q8IVD9 361 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 TAB3Q8N5C8 712 aaPredicted RBP19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 AGBL1Q96MI9 1066 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 KIFC3Q9BVG8 833 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 SMYD3Q9H7B4 428 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 ZNF395Q9H8N7 513 aaPredicted RBP19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 PKD2L1Q9P0L9 805 aa19.35■□□□□ 0.69
SFSWAP-207ENST00000538548 ADAMTSL1Q8N6G6 1762 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms