RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 XPO7Q9UIA9 1087 aaKnown RBP26.05■■□□□ 1.76
RAB40C-204ENST00000538492 PNMA3Q9UL41 463 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 PPEF2O14830 753 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 HGSO14964 777 aaPredicted RBP26.04■■□□□ 1.76
RAB40C-204ENST00000538492 PCK1P35558 622 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 XRCC4Q13426 336 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 BBS9Q3SYG4 887 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 C3orf62Q6ZUJ4 267 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 FBXO36Q8NEA4 188 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 RABGEF1Q9UJ41 708 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 PLXNB2O15031 1838 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 RPA3P35244 121 aaPredicted RBP26.04■■□□□ 1.76
RAB40C-204ENST00000538492 CCNA1P78396 465 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 PPP1R26Q5T8A7 1209 aaPredicted RBP26.04■■□□□ 1.76
RAB40C-204ENST00000538492 SCYL2Q6P3W7 929 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 SPOCK2Q92563 424 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 UBN1Q9NPG3 1134 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 FAM49BQ9NUQ9 324 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 PSMC3IPQ9P2W1 217 aaPredicted RBP26.04■■□□□ 1.76
RAB40C-204ENST00000538492 SNX9Q9Y5X1 595 aa26.04■■□□□ 1.76
RAB40C-204ENST00000538492 ASMTLO95671 621 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 KYAT1Q16773 422 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 ICE2Q659A1 982 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 DARS2Q6PI48 645 aaKnown RBP26.03■■□□□ 1.76
RAB40C-204ENST00000538492 USP50Q70EL3 339 aaPredicted RBP26.03■■□□□ 1.76
RAB40C-204ENST00000538492 ACOT1Q86TX2 421 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 MRPL45Q9BRJ2 306 aaKnown RBP26.03■■□□□ 1.76
RAB40C-204ENST00000538492 PDHXO00330 501 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 PRPSAP2O60256 369 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 NPTXRO95502 500 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 SNAI1O95863 264 aaPredicted RBP26.03■■□□□ 1.76
RAB40C-204ENST00000538492 RDXP35241 583 aaKnown RBP26.03■■□□□ 1.76
RAB40C-204ENST00000538492 GEMIN4P57678 1058 aaKnown RBP26.03■■□□□ 1.76
RAB40C-204ENST00000538492 PMF1Q6P1K2 205 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 C1orf228Q6PIY5 440 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 ATP11CQ8NB49 1132 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 PITPNM3Q9BZ71 974 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 KATNBL1Q9H079 304 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 ZNF408Q9H9D4 720 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 GPATCH2LQ9NWQ4 482 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 ARL2BPQ9Y2Y0 163 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 COL1A2P08123 1366 aa26.03■■□□□ 1.76
RAB40C-204ENST00000538492 CA4P22748 312 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 DPYSL3Q14195 570 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 DENND1AQ8TEH3 1009 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 FBF1Q8TES7 1133 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 SNTG2Q9NY99 539 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 SLC24A2Q9UI40 661 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 GRID1Q9ULK0 1009 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 ROR1Q01973 937 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 DNAJC3Q13217 504 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 EFHC2Q5JST6 749 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 THOC1Q96FV9 657 aaKnown RBP26.02■■□□□ 1.76
RAB40C-204ENST00000538492 ZMAT2Q96NC0 199 aaKnown RBP26.02■■□□□ 1.76
RAB40C-204ENST00000538492 FAM49AQ9H0Q0 323 aaPredicted RBP26.02■■□□□ 1.76
RAB40C-204ENST00000538492 NGRNQ9NPE2 291 aaKnown RBP26.02■■□□□ 1.76
RAB40C-204ENST00000538492 SETD4Q9NVD3 440 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 HES2Q9Y543 173 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 PRPF4O43172 522 aaKnown RBP eCLIP26.02■■□□□ 1.762e-7■■■■■ 38.1
RAB40C-204ENST00000538492 GSTA1P08263 222 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 PHBP35232 272 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 MTFR1Q15390 333 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 CCDC14Q49A88 953 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 SCUBE3Q8IX30 993 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 PALM2Q8IXS6 379 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 PDIK1LQ8N165 341 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 EMID1Q96A84 441 aaPredicted RBP26.02■■□□□ 1.76
RAB40C-204ENST00000538492 RMDN2Q96LZ7 410 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 LPIN3Q9BQK8 851 aa26.02■■□□□ 1.76
RAB40C-204ENST00000538492 GBA2Q9HCG7 927 aaPredicted RBP26.02■■□□□ 1.76
RAB40C-204ENST00000538492 MAP3K6O95382 1288 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 SMPD1P17405 629 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 KRT81Q14533 505 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 GLRA4Q5JXX5 417 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 LDLRAD1Q5T700 205 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 TTC30AQ86WT1 665 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.01■■□□□ 1.75
RAB40C-204ENST00000538492 RBM47A0AV96 593 aaKnown RBP26.01■■□□□ 1.75
RAB40C-204ENST00000538492 ENDOD1O94919 500 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 KRT4P19013 534 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 GRM5P41594 1212 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 NOMO1Q15155 1222 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 ZC3H12AQ5D1E8 599 aaKnown RBP26.01■■□□□ 1.75
RAB40C-204ENST00000538492 ZC3H15Q8WU90 426 aaKnown RBP26.01■■□□□ 1.75
RAB40C-204ENST00000538492 PRKAG3Q9UGI9 489 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 TUBGCP4Q9UGJ1 667 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 CHMP2BQ9UQN3 213 aa26.01■■□□□ 1.75
RAB40C-204ENST00000538492 H7C0C1 242 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 ATP5OP48047 213 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 SPARCL1Q14515 664 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 SLC1A5Q15758 541 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 DPY19L2Q6NUT2 758 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 DPP9Q86TI2 863 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 PARP9Q8IXQ6 854 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 PAFAH2Q99487 392 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 SENP1Q9P0U3 644 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 KIAA1257Q9ULG3 409 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 ZMYND8Q9ULU4 1186 aaPredicted RBP26■■□□□ 1.75
RAB40C-204ENST00000538492 NME7Q9Y5B8 376 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 ECM2O94769 699 aaPredicted RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms