RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 KIAA1257Q9ULG3 409 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 BARX2Q9UMQ3 279 aaPredicted RBP9.7□□□□□ -0.86
DDB1-211ENST00000538280 NAALADL1Q9UQQ1 740 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 ZNF148Q9UQR1 794 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.69□□□□□ -0.86
DDB1-211ENST00000538280 A0A1B0GUA9 196 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 TMEM120BA0PK00 339 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 E7ESA3 106 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 GOLGA8SH3BPF8 625 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 STRNO43815 780 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 SNAI1O95863 264 aaPredicted RBP9.69□□□□□ -0.86
DDB1-211ENST00000538280 TRUB2O95900 331 aaKnown RBP9.69□□□□□ -0.86
DDB1-211ENST00000538280 KRT19P08727 400 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 SETSIPP0DME0 302 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 ETS1P14921 441 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 TSHRP16473 764 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 ADORA2AP29274 412 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 RBP5P82980 135 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 OTUD4Q01804 1114 aaKnown RBP9.69□□□□□ -0.86
DDB1-211ENST00000538280 NR1H3Q13133 447 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 MPP2Q14168 576 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 TMEM132DQ14C87 1099 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 STILQ15468 1287 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 TMEM132AQ24JP5 1023 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 SPRED3Q2MJR0 410 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 DCAF4L1Q3SXM0 396 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 CCDC38Q502W7 563 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 PKDCCQ504Y2 493 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 EFHC2Q5JST6 749 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 MARCH8Q5T0T0 291 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 GJC2Q5T442 439 aaPredicted RBP9.69□□□□□ -0.86
DDB1-211ENST00000538280 LCLAT1Q6UWP7 414 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 CCDC121Q6ZUS5 278 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 GSTA5Q7RTV2 222 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 GPR142Q7Z601 462 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 VSIG1Q86XK7 387 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 NAT8LQ8N9F0 302 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 ACTL9Q8TC94 416 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 ACSF2Q96CM8 615 aaPredicted RBP9.69□□□□□ -0.86
DDB1-211ENST00000538280 CPB2Q96IY4 423 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 CABS1Q96KC9 395 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 C9orf72Q96LT7 481 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 PEBP4Q96S96 227 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 CCDC77Q9BR77 488 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 NSRP1Q9H0G5 558 aaKnown RBP9.69□□□□□ -0.86
DDB1-211ENST00000538280 SAYSD1Q9NPB0 183 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 UBN1Q9NPG3 1134 aa9.69□□□□□ -0.86
DDB1-211ENST00000538280 DNAJC17Q9NVM6 304 aaKnown RBP9.69□□□□□ -0.86
DDB1-211ENST00000538280 CITO14578 2027 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 C2CD4BA6NLJ0 364 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 CCT8L1PA6NM43 557 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 APOC4-APOC2K7ER74 178 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 M0QYV0 167 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 DNM1LO00429 736 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 PRPF4O43172 522 aaKnown RBP eCLIP9.68□□□□□ -0.86
DDB1-211ENST00000538280 SNX3O60493 162 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 CST8O60676 142 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 DNAJC8O75937 253 aaPredicted RBP9.68□□□□□ -0.86
DDB1-211ENST00000538280 APOC2P02655 101 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 VTNP04004 478 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 PFKMP08237 780 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 MMP3P08254 477 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 GSTA1P08263 222 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 BRAFP15056 766 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 GPD1P21695 349 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 MIPP30301 263 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 RPL22P35268 128 aaKnown RBP9.68□□□□□ -0.86
DDB1-211ENST00000538280 ADCYAP1R1P41586 468 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 ZNF143P52747 638 aaPredicted RBP9.68□□□□□ -0.86
DDB1-211ENST00000538280 IGBP1P78318 339 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 MYO1EQ12965 1108 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 GPS1Q13098 491 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 GRB14Q14449 540 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 NOMO1Q15155 1222 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 ZBTB6Q15916 424 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 GRIK4Q16099 956 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 MORN1Q5T089 497 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 WDR78Q5VTH9 848 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 TRNP1Q6NT89 227 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 TRABD2AQ86V40 505 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.68□□□□□ -0.86
DDB1-211ENST00000538280 EMC1Q8N766 993 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 CPT1BQ92523 772 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 HPDLQ96IR7 371 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 CNPY3Q9BT09 278 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 DHRS4Q9BTZ2 278 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 MIS12Q9H081 205 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 PLEKHA5Q9HAU0 1116 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 TMEM51Q9NW97 253 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 ASNSD1Q9NWL6 643 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 DPP3Q9NY33 737 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 SLC24A2Q9UI40 661 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 AGAP1Q9UPQ3 857 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 AKT3Q9Y243 479 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 CAPN7Q9Y6W3 813 aa9.68□□□□□ -0.86
DDB1-211ENST00000538280 MUC3AQ02505 3323 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 CLUHO75153 1309 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 GOLGA6L7A0A1B0GV03 622 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.67□□□□□ -0.86
DDB1-211ENST00000538280 ZNF487B1APH4 448 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms