RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 AKAP3O75969 853 aa9□□□□□ -0.97
USP28-203ENST00000537490 NFATC1O95644 943 aa9□□□□□ -0.97
USP28-203ENST00000537490 APBB3O95704 486 aa9□□□□□ -0.97
USP28-203ENST00000537490 OLFM2O95897 454 aa9□□□□□ -0.97
USP28-203ENST00000537490 OAS1P00973 400 aaKnown RBP9□□□□□ -0.97
USP28-203ENST00000537490 C4BPAP04003 597 aaKnown RBP9□□□□□ -0.97
USP28-203ENST00000537490 CYP17A1P05093 508 aa9□□□□□ -0.97
USP28-203ENST00000537490 ADRB1P08588 477 aa9□□□□□ -0.97
USP28-203ENST00000537490 ATICP31939 592 aa9□□□□□ -0.97
USP28-203ENST00000537490 SLC6A11P48066 632 aa9□□□□□ -0.97
USP28-203ENST00000537490 ME1P48163 572 aa9□□□□□ -0.97
USP28-203ENST00000537490 PPP3CCP48454 512 aa9□□□□□ -0.97
USP28-203ENST00000537490 PDE6CP51160 858 aa9□□□□□ -0.97
USP28-203ENST00000537490 MESP2Q0VG99 397 aa9□□□□□ -0.97
USP28-203ENST00000537490 IFRD2Q12894 506 aaPredicted RBP9□□□□□ -0.97
USP28-203ENST00000537490 STK4Q13043 487 aa9□□□□□ -0.97
USP28-203ENST00000537490 PKP1Q13835 747 aa9□□□□□ -0.97
USP28-203ENST00000537490 AASDHQ4L235 1098 aaPredicted RBP9□□□□□ -0.97
USP28-203ENST00000537490 PPM1JQ5JR12 505 aa9□□□□□ -0.97
USP28-203ENST00000537490 PLA2G2CQ5R387 149 aa9□□□□□ -0.97
USP28-203ENST00000537490 TDRD10Q5VZ19 366 aaKnown RBP9□□□□□ -0.97
USP28-203ENST00000537490 RHBDF2Q6PJF5 856 aa9□□□□□ -0.97
USP28-203ENST00000537490 PAQR9Q6ZVX9 377 aa9□□□□□ -0.97
USP28-203ENST00000537490 FILIP1Q7Z7B0 1213 aa9□□□□□ -0.97
USP28-203ENST00000537490 NUP93Q8N1F7 819 aa9□□□□□ -0.97
USP28-203ENST00000537490 B3GALNT2Q8NCR0 500 aa9□□□□□ -0.97
USP28-203ENST00000537490 PARD3BQ8TEW8 1205 aa9□□□□□ -0.97
USP28-203ENST00000537490 SYAP1Q96A49 352 aaPredicted RBP9□□□□□ -0.97
USP28-203ENST00000537490 ZC3H10Q96K80 434 aaKnown RBP9□□□□□ -0.97
USP28-203ENST00000537490 KCNK16Q96T55 309 aa9□□□□□ -0.97
USP28-203ENST00000537490 ELOVL4Q9GZR5 314 aa9□□□□□ -0.97
USP28-203ENST00000537490 SDCBP2Q9H190 292 aa9□□□□□ -0.97
USP28-203ENST00000537490 DUSP15Q9H1R2 295 aaPredicted RBP9□□□□□ -0.97
USP28-203ENST00000537490 SMYD3Q9H7B4 428 aa9□□□□□ -0.97
USP28-203ENST00000537490 DMAC2Q9NW81 257 aa9□□□□□ -0.97
USP28-203ENST00000537490 FAM13BQ9NYF5 915 aa9□□□□□ -0.97
USP28-203ENST00000537490 EHD2Q9NZN4 543 aa9□□□□□ -0.97
USP28-203ENST00000537490 CGNQ9P2M7 1197 aaKnown RBP9□□□□□ -0.97
USP28-203ENST00000537490 EBF1Q9UH73 591 aa9□□□□□ -0.97
USP28-203ENST00000537490 CHORDC1Q9UHD1 332 aaPredicted RBP9□□□□□ -0.97
USP28-203ENST00000537490 RCOR1Q9UKL0 485 aa9□□□□□ -0.97
USP28-203ENST00000537490 INVSQ9Y283 1065 aa9□□□□□ -0.97
USP28-203ENST00000537490 OBSL1O75147 1896 aa9□□□□□ -0.97
USP28-203ENST00000537490 TM4SF5O14894 197 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
USP28-203ENST00000537490 FOXD2O60548 495 aaPredicted RBP8.99□□□□□ -0.97
USP28-203ENST00000537490 VNN1O95497 513 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 MBL2P11226 248 aaPredicted RBP8.99□□□□□ -0.97
USP28-203ENST00000537490 YWHAQP27348 245 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 DGKEP52429 567 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 LIMK1P53667 647 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 SEC13P55735 322 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 DLG4P78352 724 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 CLDN10P78369 228 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 DNM1Q05193 864 aaKnown RBP8.99□□□□□ -0.97
USP28-203ENST00000537490 BIRC3Q13489 604 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 DHCR24Q15392 516 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 KMT5BQ4FZB7 885 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 C2orf27AQ580R0 203 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 C12orf40Q86WS4 652 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 SFTPA1Q8IWL2 248 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 CCDC33Q8N5R6 958 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 C12orf50Q8NA57 414 aaPredicted RBP8.99□□□□□ -0.97
USP28-203ENST00000537490 SPRYD3Q8NCJ5 442 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 KIAA0895Q8NCT3 520 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 SCAMP5Q8TAC9 235 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 ACDQ96AP0 544 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 PAGE5Q96GU1 130 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 SLITRK1Q96PX8 696 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 VRTNQ9H8Y1 702 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 CFAP97Q9P2B7 532 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 PCDHGA5Q9Y5G8 931 aa8.99□□□□□ -0.97
USP28-203ENST00000537490 TPRP12270 2363 aaKnown RBP8.98□□□□□ -0.97
USP28-203ENST00000537490 SLC9A3R1O14745 358 aaPredicted RBP8.98□□□□□ -0.97
USP28-203ENST00000537490 TNFRSF10BO14763 440 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 COCHO43405 550 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 BEST1O76090 585 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 RTN3O95197 1032 aaPredicted RBP8.98□□□□□ -0.97
USP28-203ENST00000537490 SLFN14P0C7P3 912 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 CHRM1P11229 460 aaPredicted RBP8.98□□□□□ -0.97
USP28-203ENST00000537490 PDIA4P13667 645 aaKnown RBP8.98□□□□□ -0.97
USP28-203ENST00000537490 HNRNPLP14866 589 aaKnown RBP eCLIP8.98□□□□□ -0.97
USP28-203ENST00000537490 MPLP40238 635 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 AP3M2P53677 418 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 SLC5A3P53794 718 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 NCOA4Q13772 614 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 ZNF699Q32M78 642 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 ZNF667Q5HYK9 610 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 EMC10Q5UCC4 262 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 ATL3Q6DD88 541 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 IL31Q6EBC2 164 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 TCEAL6Q6IPX3 200 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 TMEM92Q6UXU6 159 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 SCARA5Q6ZMJ2 495 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 ACOT1Q86TX2 421 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 FAM35AQ86V20 835 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 SLC9A9Q8IVB4 645 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 HSCBQ8IWL3 235 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 CEP57L1Q8IYX8 460 aa8.98□□□□□ -0.97
USP28-203ENST00000537490 FUKQ8N0W3 1084 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms