RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 HHLA1C9JL84 531 aa18.32■□□□□ 0.52
GPN3-202ENST00000537466 CHADO15335 359 aa18.32■□□□□ 0.52
GPN3-202ENST00000537466 AOC1P19801 751 aa18.32■□□□□ 0.52
GPN3-202ENST00000537466 CD72P21854 359 aa18.32■□□□□ 0.52
GPN3-202ENST00000537466 PHLDB3Q6NSJ2 640 aa18.32■□□□□ 0.52
GPN3-202ENST00000537466 TPRG1Q6ZUI0 275 aa18.32■□□□□ 0.52
GPN3-202ENST00000537466 RRAGAQ7L523 313 aa18.32■□□□□ 0.52
GPN3-202ENST00000537466 FBXO32Q969P5 355 aa18.32■□□□□ 0.52
GPN3-202ENST00000537466 SLITRK1Q96PX8 696 aa18.32■□□□□ 0.52
GPN3-202ENST00000537466 FOXQ1Q9C009 403 aa18.32■□□□□ 0.52
GPN3-202ENST00000537466 INTS2Q9H0H0 1204 aaKnown RBP18.32■□□□□ 0.52
GPN3-202ENST00000537466 ABL1P00519 1130 aa18.31■□□□□ 0.52
GPN3-202ENST00000537466 CKMP06732 381 aa18.31■□□□□ 0.52
GPN3-202ENST00000537466 USP17L7P0C7H9 530 aa18.31■□□□□ 0.52
GPN3-202ENST00000537466 ACO1P21399 889 aaKnown RBP18.31■□□□□ 0.52
GPN3-202ENST00000537466 RFX1P22670 979 aa18.31■□□□□ 0.52
GPN3-202ENST00000537466 MTIF2P46199 727 aaKnown RBP18.31■□□□□ 0.52
GPN3-202ENST00000537466 YWHAEP62258 255 aaKnown RBP18.31■□□□□ 0.52
GPN3-202ENST00000537466 PRKCQQ04759 706 aa18.31■□□□□ 0.52
GPN3-202ENST00000537466 CRACR2AQ9BSW2 395 aa18.31■□□□□ 0.52
GPN3-202ENST00000537466 DDX23Q9BUQ8 820 aaKnown RBP18.31■□□□□ 0.52
GPN3-202ENST00000537466 DNAI2Q9GZS0 605 aa18.31■□□□□ 0.52
GPN3-202ENST00000537466 RNF38Q9H0F5 515 aa18.31■□□□□ 0.52
GPN3-202ENST00000537466 TRPV5Q9NQA5 729 aa18.31■□□□□ 0.52
GPN3-202ENST00000537466 CHORDC1Q9UHD1 332 aaPredicted RBP18.31■□□□□ 0.52
GPN3-202ENST00000537466 FAM92AA1XBS5 289 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 HDCP19113 662 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 PPP3CCP48454 512 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 PGFP49763 221 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 ZXDBP98169 803 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 ZNF268Q14587 947 aaPredicted RBP18.3■□□□□ 0.52
GPN3-202ENST00000537466 ARHGAP29Q52LW3 1261 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 ARHGAP17Q68EM7 881 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 TMEM270Q6UE05 265 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 SHDQ96IW2 340 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 KREMEN1Q96MU8 473 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 DUSP16Q9BY84 665 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 KIF9Q9HAQ2 790 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 SAMSN1Q9NSI8 373 aaKnown RBP18.3■□□□□ 0.52
GPN3-202ENST00000537466 GMIPQ9P107 970 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 TMEM63CQ9P1W3 806 aa18.3■□□□□ 0.52
GPN3-202ENST00000537466 MTF2Q9Y483 593 aaPredicted RBP18.3■□□□□ 0.52
GPN3-202ENST00000537466 KANSL1LA0AUZ9 987 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 RNF225M0QZC1 329 aaPredicted RBP18.29■□□□□ 0.52
GPN3-202ENST00000537466 OAS1P00973 400 aaKnown RBP18.29■□□□□ 0.52
GPN3-202ENST00000537466 GCNT1Q02742 428 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 TNK2Q07912 1038 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 ZNF77Q15935 545 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 CT47A1Q5JQC4 288 aaPredicted RBP18.29■□□□□ 0.52
GPN3-202ENST00000537466 CCDC183Q5T5S1 534 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 C11orf57Q6ZUT1 292 aaPredicted RBP18.29■□□□□ 0.52
GPN3-202ENST00000537466 TTC16Q8NEE8 873 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 PDZD8Q8NEN9 1154 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 PRSS33Q8NF86 280 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 TTC8Q8TAM2 541 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 OVCA2Q8WZ82 227 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 COMMD8Q9NX08 183 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 GTSE1Q9NYZ3 720 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 PCDHB4Q9Y5E5 795 aa18.29■□□□□ 0.52
GPN3-202ENST00000537466 OLFM2O95897 454 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 CALCAP01258 141 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 DCNP07585 359 aaKnown RBP18.28■□□□□ 0.52
GPN3-202ENST00000537466 ZDHHC11BP0C7U3 371 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 CD19P15391 556 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 SLC9A1P19634 815 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 APBA1Q02410 837 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 USP4Q13107 963 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 MAN2A1Q16706 1144 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 GOLGA7BQ2TAP0 167 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 TRIM68Q6AZZ1 485 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 TRIM65Q6PJ69 517 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 SASS6Q6UVJ0 657 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 TTC30AQ86WT1 665 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 FAM114A1Q8IWE2 563 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 PJA1Q8NG27 643 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 CSGALNACT1Q8TDX6 532 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 PNPLA8Q9NP80 782 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 GKN1Q9NS71 199 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 TSPAN16Q9UKR8 245 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 ARHGAP26Q9UNA1 814 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 SIT1Q9Y3P8 196 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 PIAS3Q9Y6X2 628 aa18.28■□□□□ 0.52
GPN3-202ENST00000537466 PFKLP17858 780 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 SOX9P48436 509 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 MTF1Q14872 753 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 UBXN2BQ14CS0 331 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 SGO2Q562F6 1265 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 MIIPQ5JXC2 388 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 SNX30Q5VWJ9 437 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 GJB7Q6PEY0 223 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 ANKRD52Q8NB46 1076 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 ENOX1Q8TC92 643 aaKnown RBP18.27■□□□□ 0.52
GPN3-202ENST00000537466 SH3RF2Q8TEC5 729 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 TFAP2BQ92481 460 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 FAM83CQ9BQN1 747 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 ZSWIM1Q9BR11 485 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 FBXO44Q9H4M3 255 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 CCSER2Q9H7U1 834 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 LTB4R2Q9NPC1 389 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 THG1LQ9NWX6 298 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms