RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 C1orf131Q8NDD1 294 aaKnown RBP16.43■□□□□ 0.22
CNN1-202ENST00000535659 PSMG2Q969U7 264 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 PABPC5Q96DU9 382 aaKnown RBP16.43■□□□□ 0.22
CNN1-202ENST00000535659 PPP1R13BQ96KQ4 1090 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 PRKD2Q9BZL6 878 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 DEF6Q9H4E7 631 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 LRRC4Q9HBW1 653 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 CYLDQ9NQC7 956 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 ST7Q9NRC1 585 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 COMMD8Q9NX08 183 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 CLDND1Q9NY35 253 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 XIRP2A4UGR9 3374 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 A0A087X0T9 212 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 AKR1B10O60218 316 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 XYLBO75191 536 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 GABBR2O75899 941 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 RTN3O95197 1032 aaPredicted RBP16.42■□□□□ 0.22
CNN1-202ENST00000535659 PAPLNO95428 1278 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 POU2F2P09086 479 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 FAM228BP0C875 321 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 ACADSBP45954 432 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 KIF11P52732 1056 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 SNX16P57768 344 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 CCDC173Q0VFZ6 552 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 PDCLQ13371 301 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 MTMR3Q13615 1198 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 EP400NLQ6ZTU2 488 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 LRRC8AQ8IWT6 810 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 CMASQ8NFW8 434 aaPredicted RBP16.42■□□□□ 0.22
CNN1-202ENST00000535659 SCAMP5Q8TAC9 235 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 PPP1R9BQ96SB3 815 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 SFXN1Q9H9B4 322 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 IL37Q9NZH6 218 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 EHD2Q9NZN4 543 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 CLEC1BQ9P126 229 aa16.42■□□□□ 0.22
CNN1-202ENST00000535659 PTPRDP23468 1912 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 MTCL1Q9Y4B5 1905 aaKnown RBP16.41■□□□□ 0.22
CNN1-202ENST00000535659 HMGA1P17096 107 aaKnown RBP16.41■□□□□ 0.22
CNN1-202ENST00000535659 PTPN2P17706 415 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 LTBRP36941 435 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 NSFP46459 744 aaKnown RBP16.41■□□□□ 0.22
CNN1-202ENST00000535659 TKTL1P51854 596 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 SLC5A3P53794 718 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 USP46P62068 366 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 CENPCQ03188 943 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 SLC18A3Q16572 532 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 PPP1R2P3Q6NXS1 205 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 SYCE2Q6PIF2 218 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 TMC5Q6UXY8 1006 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 GPRIN1Q7Z2K8 1008 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 CCDC170Q8IYT3 715 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 STKLD1Q8NE28 680 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 ZNF707Q96C28 371 aaPredicted RBP16.41■□□□□ 0.22
CNN1-202ENST00000535659 MYRFLQ96LU7 910 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 CPXM1Q96SM3 734 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 COL25A1Q9BXS0 654 aaPredicted RBP16.41■□□□□ 0.22
CNN1-202ENST00000535659 FBXO44Q9H4M3 255 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 MAGED2Q9UNF1 606 aaPredicted RBP16.41■□□□□ 0.22
CNN1-202ENST00000535659 USP3Q9Y6I4 520 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 UNC80Q8N2C7 3258 aa16.41■□□□□ 0.22
CNN1-202ENST00000535659 TMCO5BA8MYB1 307 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 RTN2O75298 545 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 PTMAP06454 111 aaKnown RBP16.4■□□□□ 0.22
CNN1-202ENST00000535659 LCP1P13796 627 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 YWHAQP27348 245 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 GFPT1Q06210 699 aaPredicted RBP16.4■□□□□ 0.22
CNN1-202ENST00000535659 DLX2Q07687 328 aaPredicted RBP16.4■□□□□ 0.22
CNN1-202ENST00000535659 ALKBH5Q6P6C2 394 aaKnown RBP16.4■□□□□ 0.22
CNN1-202ENST00000535659 PHF13Q86YI8 300 aaPredicted RBP16.4■□□□□ 0.22
CNN1-202ENST00000535659 TMEM139Q8IV31 216 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 SCUBE3Q8IX30 993 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 MSANTD4Q8NCY6 345 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 PPM1EQ8WY54 764 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 C18orf8Q96DM3 657 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 TTLL2Q9BWV7 592 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 ISCUQ9H1K1 167 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 SYNCQ9H7C4 482 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 PIDD1Q9HB75 910 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 TAS2R14Q9NYV8 317 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 NAGPAQ9UK23 515 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 FAM170AA1A519 330 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 FAM92AA1XBS5 289 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 E5RJQ4 531 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 PIK3R2O00459 728 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 FTLP02792 175 aaPredicted RBP16.4■□□□□ 0.22
CNN1-202ENST00000535659 MMP8P22894 467 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 GABRB2P47870 512 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 ADIGQ0VDE8 80 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 IFRD2Q12894 506 aaPredicted RBP16.4■□□□□ 0.22
CNN1-202ENST00000535659 PTPN20Q4JDL3 420 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 CCDC122Q5T0U0 273 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 RARS2Q5T160 578 aaKnown RBP16.4■□□□□ 0.22
CNN1-202ENST00000535659 PM20D1Q6GTS8 502 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 GPR149Q86SP6 731 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 SIX6OS1Q8N1H7 587 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 CCDC112Q8NEF3 446 aa16.4■□□□□ 0.22
CNN1-202ENST00000535659 IPO4Q8TEX9 1081 aaKnown RBP16.4■□□□□ 0.22
CNN1-202ENST00000535659 SMG7Q92540 1137 aaKnown RBP16.4■□□□□ 0.22
CNN1-202ENST00000535659 TRMT2BQ96GJ1 504 aaKnown RBP16.4■□□□□ 0.22
CNN1-202ENST00000535659 CORO1BQ9BR76 489 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms