RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 GBP5Q96PP8 586 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 ANKEF1Q9NU02 776 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 NXF1Q9UBU9 619 aaKnown RBP13.99□□□□□ -0.17
HDAC4-214ENST00000535493 ANPEPP15144 967 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 DPYSL3Q14195 570 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 MROH9Q5TGP6 573 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 DENND1BQ6P3S1 775 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 C1orf228Q6PIY5 440 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 SCUBE1Q8IWY4 988 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 ULK2Q8IYT8 1036 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 TTLL6Q8N841 843 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 KCTD6Q8NC69 237 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 ZNF398Q8TD17 642 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 APOPT1Q96IL0 206 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 VCPIP1Q96JH7 1222 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 TCHPQ9BT92 498 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 CISHQ9NSE2 258 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 ARHGAP28Q9P2N2 729 aa13.99□□□□□ -0.17
HDAC4-214ENST00000535493 E2F8A0AVK6 867 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 K7ERI5 159 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 RNASEH1O60930 286 aaKnown RBP13.98□□□□□ -0.17
HDAC4-214ENST00000535493 GSTT1P30711 240 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 MCL1Q07820 350 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 PTPN20Q4JDL3 420 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 RALGPS1Q5JS13 557 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 LPCAT4Q643R3 524 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 CIAPIN1Q6FI81 312 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 SH2D5Q6ZV89 423 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 CCDC110Q8TBZ0 833 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 EBF3Q9H4W6 596 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 CYP26B1Q9NR63 512 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 PXMP2Q9NR77 195 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 PIH1D1Q9NWS0 290 aaKnown RBP13.98□□□□□ -0.17
HDAC4-214ENST00000535493 SLC17A6Q9P2U8 582 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 ZNF70Q9UC06 446 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-214ENST00000535493 PACSIN3Q9UKS6 424 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 TCRBV5S1A1TA0A578 114 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 MAGEA13PA6NCF6 341 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 ARHGAP42A6NI28 874 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 LYPLA1O75608 230 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-214ENST00000535493 GRAP2O75791 330 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 STBD1O95210 358 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 DHRS4L1P0CG22 281 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 KRT3P12035 628 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 KDELR1P24390 212 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 JAK3P52333 1124 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 EPHB1P54762 984 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 CDH8P55286 799 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 MRPS5P82675 430 aaKnown RBP13.98□□□□□ -0.17
HDAC4-214ENST00000535493 TRIM72Q6ZMU5 477 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 MFN1Q8IWA4 741 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 SMC1BQ8NDV3 1235 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 MRIQ9BWK5 157 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 PHACTR1Q9C0D0 580 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 CYP4F11Q9HBI6 524 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 STRIP2Q9ULQ0 834 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 NR2E3Q9Y5X4 410 aa13.98□□□□□ -0.17
HDAC4-214ENST00000535493 IQANK1A0A1B0GTG1 560 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 STAM2O75886 525 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 PDE5AO76074 875 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 RGS20O76081 388 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 RTN3O95197 1032 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-214ENST00000535493 RTP1P59025 263 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 KRT76Q01546 638 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 SLC25A11Q02978 314 aaKnown RBP13.97□□□□□ -0.17
HDAC4-214ENST00000535493 CDO1Q16878 200 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 DARS2Q6PI48 645 aaKnown RBP13.97□□□□□ -0.17
HDAC4-214ENST00000535493 SLC44A1Q8WWI5 657 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 SMYD2Q9NRG4 433 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 NFASCO94856 1347 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 AHDC1Q5TGY3 1603 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-214ENST00000535493 QSER1Q2KHR3 1735 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 A0A0B4J269 797 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 C6orf222P0C671 652 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-214ENST00000535493 SPATA31D3P0C874 917 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 RPS6KA3P51812 740 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 CMPK2Q5EBM0 449 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 C16orf46Q6P387 395 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 SPATA31D4Q6ZUB0 917 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 UNC5BQ8IZJ1 945 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 FAF2Q96CS3 445 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 APOL6Q9BWW8 343 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 RAB6BQ9NRW1 208 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 CNTN3Q9P232 1028 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 HEY1Q9Y5J3 304 aa13.97□□□□□ -0.17
HDAC4-214ENST00000535493 BPTFQ12830 3046 aa13.96□□□□□ -0.17
HDAC4-214ENST00000535493 CAPN14A8MX76 684 aa13.96□□□□□ -0.17
HDAC4-214ENST00000535493 DNAJC6O75061 913 aa13.96□□□□□ -0.17
HDAC4-214ENST00000535493 ZMPSTE24O75844 475 aa13.96□□□□□ -0.17
HDAC4-214ENST00000535493 DGAT1O75907 488 aa13.96□□□□□ -0.17
HDAC4-214ENST00000535493 RNF8O76064 485 aa13.96□□□□□ -0.17
HDAC4-214ENST00000535493 PSMC1P62191 440 aaKnown RBP13.96□□□□□ -0.17
HDAC4-214ENST00000535493 TFAMQ00059 246 aaKnown RBP13.96□□□□□ -0.17
HDAC4-214ENST00000535493 PDE1BQ01064 536 aa13.96□□□□□ -0.17
HDAC4-214ENST00000535493 PIGHQ14442 188 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-214ENST00000535493 DLGAP5Q15398 846 aa13.96□□□□□ -0.17
HDAC4-214ENST00000535493 TRMT10BQ6PF06 316 aaKnown RBP13.96□□□□□ -0.17
HDAC4-214ENST00000535493 SEPT12Q8IYM1 358 aa13.96□□□□□ -0.17
HDAC4-214ENST00000535493 TMEM35BQ8NCS4 154 aa13.96□□□□□ -0.17
HDAC4-214ENST00000535493 MTBPQ96DY7 904 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms