RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 H7C4K7 107 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 SMIM22K7EJ46 135 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 RAB27BO00194 218 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 VNN1O95497 513 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 TPH1P17752 444 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 EPHA3P29320 983 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 SRSF4Q08170 494 aaKnown RBP6.19□□□□□ -1.42
PRKDC-205ENST00000535375 SEMA5AQ13591 1074 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 L1TD1Q5T7N2 865 aaKnown RBP6.19□□□□□ -1.42
PRKDC-205ENST00000535375 SESTD1Q86VW0 696 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 TIFAQ96CG3 184 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 COL20A1Q9P218 1284 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 CHPF2Q9P2E5 772 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 AOX1Q06278 1338 aa6.19□□□□□ -1.42
PRKDC-205ENST00000535375 AP4M1O00189 453 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 PIAS2O75928 621 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 PARNO95453 639 aaKnown RBP6.18□□□□□ -1.42
PRKDC-205ENST00000535375 PROK1P58294 105 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 SUMO2P61956 95 aaKnown RBP6.18□□□□□ -1.42
PRKDC-205ENST00000535375 CYP4F2P78329 520 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 HOXA4Q00056 320 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-205ENST00000535375 SLC10A2Q12908 348 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-205ENST00000535375 GRM1Q13255 1194 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 KCTD20Q7Z5Y7 419 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 SDR16C5Q8N3Y7 309 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 SIRT6Q8N6T7 355 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 VOPP1Q96AW1 172 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 RSPRY1Q96DX4 576 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 STRBPQ96SI9 672 aaKnown RBP6.18□□□□□ -1.42
PRKDC-205ENST00000535375 APOL5Q9BWW9 433 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 TRIM5Q9C035 493 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 CHST8Q9H2A9 424 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 DHX36Q9H2U1 1008 aaKnown RBP6.18□□□□□ -1.42
PRKDC-205ENST00000535375 TFCP2L1Q9NZI6 479 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 DNMT3BQ9UBC3 853 aaKnown RBP6.18□□□□□ -1.42
PRKDC-205ENST00000535375 GABRQQ9UN88 632 aa6.18□□□□□ -1.42
PRKDC-205ENST00000535375 DRG1Q9Y295 367 aaKnown RBP6.18□□□□□ -1.42
PRKDC-205ENST00000535375 AQP7P3A6NL99 342 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 RRP9O43818 475 aaKnown RBP6.17□□□□□ -1.42
PRKDC-205ENST00000535375 EXOC3O60645 756 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 PQBP1O60828 265 aaKnown RBP6.17□□□□□ -1.42
PRKDC-205ENST00000535375 TJP3O95049 919 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 TXNP10599 105 aaKnown RBP6.17□□□□□ -1.42
PRKDC-205ENST00000535375 ACVR2AP27037 513 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 CTGFP29279 349 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 UQCRC1P31930 480 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 CPT1AP50416 773 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 E2F1Q01094 437 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 STK3Q13188 491 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 KIAA1614Q5VZ46 1190 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 TRIM72Q6ZMU5 477 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 UNC13DQ70J99 1090 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 SEMA6DQ8NFY4 1073 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 DAZAP1Q96EP5 407 aaKnown RBP6.17□□□□□ -1.42
PRKDC-205ENST00000535375 CCDC136Q96JN2 1154 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 BTBD1Q9H0C5 482 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 ZNF212Q9UDV6 495 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 MID2Q9UJV3 735 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 FRMD4BQ9Y2L6 1034 aa6.17□□□□□ -1.42
PRKDC-205ENST00000535375 LINC01548A6NM66 108 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 FOXN3O00409 490 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-205ENST00000535375 CES2O00748 559 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 ZNF213O14771 459 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 CD3EAPO15446 510 aaKnown RBP6.16□□□□□ -1.42
PRKDC-205ENST00000535375 PDE8BO95263 885 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 CARSP49589 748 aaKnown RBP6.16□□□□□ -1.42
PRKDC-205ENST00000535375 GALEQ14376 348 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 PRAMEF17Q5VTA0 474 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 DPY19L3Q6ZPD9 716 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 CCAR1Q8IX12 1150 aaKnown RBP6.16□□□□□ -1.42
PRKDC-205ENST00000535375 CYP2W1Q8TAV3 490 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 REPS1Q96D71 796 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 MSLNLQ96KJ4 702 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 SNX22Q96L94 193 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 INO80BQ9C086 356 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-205ENST00000535375 UNKQ9C0B0 810 aaKnown RBP6.16□□□□□ -1.42
PRKDC-205ENST00000535375 FAM83DQ9H4H8 585 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 PNPLA8Q9NP80 782 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 SERGEFQ9UGK8 458 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 AMFRQ9UKV5 643 aa6.16□□□□□ -1.42
PRKDC-205ENST00000535375 RHPN2P1A8MT19 583 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 KIF3BO15066 747 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 MYCLP12524 364 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-205ENST00000535375 GATMP50440 423 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 PGDP52209 483 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 TUBA4AP68366 448 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 NPY5RQ15761 445 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 COLEC12Q5KU26 742 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 DENND2CQ68D51 928 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 SERPINA13PQ6UXR4 307 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 RNF44Q7L0R7 432 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 TERB1Q8NA31 727 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 DPF1Q92782 380 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 PHKBQ93100 1093 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 ZBTB45Q96K62 511 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-205ENST00000535375 C8orf48Q96LL4 319 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 LENG8Q96PV6 779 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-205ENST00000535375 PRR25Q96S07 402 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 BRIP1Q9BX63 1249 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 CIPCQ9C0C6 399 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms