RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 IKBKBO14920 756 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 HRO43593 1189 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 RNF40O75150 1001 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 RHOBTB3O94955 611 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 RTN3O95197 1032 aaPredicted RBP17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 VNN1O95497 513 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 NFATC1O95644 943 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 YWHAQP27348 245 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 SLC7A9P82251 487 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 PUM1Q14671 1186 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 SV2AQ7L0J3 742 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 CD101Q93033 1021 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 FBXO32Q969P5 355 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 CCDC34Q96HJ3 373 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 LINC00597Q9H2U6 94 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 TRAF3IP3Q9Y228 551 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 CACNA1AO00555 2505 aa17.2■□□□□ 0.34
CLSTN3-204ENST00000535313 RETP07949 1114 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 TRIM21P19474 475 aaKnown RBP17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 SDHBP21912 280 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 RPL13P26373 211 aaKnown RBP17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 VAMP7P51809 220 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 LMNB2Q03252 620 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 DPYDQ12882 1025 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 PKN3Q6P5Z2 889 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 KRBA2Q6ZNG9 492 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 CEP68Q76N32 757 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 DGLUCYQ7Z3D6 616 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 FAM35AQ86V20 835 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 WDR5BQ86VZ2 330 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 KIAA1958Q8N8K9 716 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 PDZD8Q8NEN9 1154 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 CCDC26Q8TAB7 109 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 ELMO3Q96BJ8 720 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 SMARCD1Q96GM5 515 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 KCNK16Q96T55 309 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 RNF38Q9H0F5 515 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 SDCBP2Q9H190 292 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 FBRSL1Q9HCM7 1045 aaKnown RBP17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 DMAP1Q9NPF5 467 aaPredicted RBP17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 TMEM30AQ9NV96 361 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 CPQQ9Y646 472 aa17.19■□□□□ 0.34
CLSTN3-204ENST00000535313 PRR5-ARHGAP8B1AHC4 643 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 SLC9A3R1O14745 358 aaPredicted RBP17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 MAPK13O15264 365 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 OLFM2O95897 454 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 OAS1P00973 400 aaKnown RBP17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 KRT13P13646 458 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 NR2F2P24468 414 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 PIK3CAP42336 1068 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 ARHGAP8P85298 464 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 ZXDBP98169 803 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 SRSF5Q13243 272 aaKnown RBP17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 NFIL3Q16649 462 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 RSPO4Q2I0M5 234 aaPredicted RBP17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 NAIF1Q69YI7 327 aaPredicted RBP17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 INTS8Q75QN2 995 aaKnown RBP17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 ACOT1Q86TX2 421 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 DDX42Q86XP3 938 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 OVCA2Q8WZ82 227 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 IMPG2Q9BZV3 1241 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 SMPD4Q9NXE4 827 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
CLSTN3-204ENST00000535313 CCDC163A0A0D9SF12 145 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 LRP3O75074 770 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 AP1G2O75843 785 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 ZNF202O95125 648 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 ASS1P00966 412 aaKnown RBP17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 HLA-DRAP01903 254 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 MBL2P11226 248 aaPredicted RBP17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 NDST1P52848 882 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 SLC5A3P53794 718 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 SPEM2Q0P670 501 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 FILIP1Q7Z7B0 1213 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 UNC93AQ86WB7 457 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 FAM186BQ8IYM0 893 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 GUF1Q8N442 669 aaKnown RBP17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 RPLP0P6Q8NHW5 317 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 GOLPH3LQ9H4A5 285 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 KRT82Q9NSB4 513 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 COMMD8Q9NX08 183 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 DLL3Q9NYJ7 618 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 ATG2BQ96BY7 2078 aa17.17■□□□□ 0.34
CLSTN3-204ENST00000535313 AKAP3O75969 853 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 HOXC13P31276 330 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 PSMC2P35998 433 aaKnown RBP17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 PXNP49023 591 aaPredicted RBP17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 ADAM9Q13443 819 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 C1orf220Q5T0J3 134 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 HECTD3Q5T447 861 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 SPOPLQ6IQ16 392 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 PAQR9Q6ZVX9 377 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 FUKQ8N0W3 1084 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 CRYBG2Q8N1P7 616 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 CAMKK1Q8N5S9 505 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 CCDC150Q8NCX0 1101 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 SCAMP5Q8TAC9 235 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 SLC2A14Q8TDB8 520 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms