RNA–Protein interactions for RNA: ENST00000534455.5

SC5D-209, Transcript of sterol-C5-desaturase, humanhuman

TSL 2

Gene SC5D, Length 921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-209ENST00000534455 ATP8B3O60423 1300 aa17.16■□□□□ 0.34
SC5D-209ENST00000534455 OTOL1A6NHN0 477 aaPredicted RBP17.15■□□□□ 0.34
SC5D-209ENST00000534455 F8VP50 259 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 K7ESF4 209 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 STAU1O95793 577 aaKnown RBP17.15■□□□□ 0.34
SC5D-209ENST00000534455 RETP07949 1114 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 PFKLP17858 780 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 DMWDQ09019 674 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 SPEM2Q0P670 501 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 ZNF77Q15935 545 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 ZNF699Q32M78 642 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 FBXO43Q4G163 708 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 ZNF667Q5HYK9 610 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 TDRD10Q5VZ19 366 aaKnown RBP17.15■□□□□ 0.34
SC5D-209ENST00000534455 FSTL4Q6MZW2 842 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 C8orf48Q96LL4 319 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 SLITRK1Q96PX8 696 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 KCTD10Q9H3F6 313 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 CDV3Q9UKY7 258 aaKnown RBP17.15■□□□□ 0.34
SC5D-209ENST00000534455 WNT6Q9Y6F9 365 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 DMXL1Q9Y485 3027 aa17.15■□□□□ 0.34
SC5D-209ENST00000534455 KIF26AQ9ULI4 1882 aaPredicted RBP17.14■□□□□ 0.33
SC5D-209ENST00000534455 HRO43593 1189 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 KIF20AO95235 890 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 P4HA1P13674 534 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 HOXA6P31267 233 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 GJA4P35212 333 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 CASP4P49662 377 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 GALK1P51570 392 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 PMS1P54277 932 aaKnown RBP17.14■□□□□ 0.33
SC5D-209ENST00000534455 IFRD2Q12894 506 aaPredicted RBP17.14■□□□□ 0.33
SC5D-209ENST00000534455 USP4Q13107 963 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 STX1AQ16623 288 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 ZCWPW2Q504Y3 356 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 SASS6Q6UVJ0 657 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 B3GALNT2Q8NCR0 500 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 CCDC26Q8TAB7 109 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 RIN3Q8TB24 985 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 ZNF516Q92618 1163 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 MED15Q96RN5 788 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 MED10Q9BTT4 135 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 GCNT4Q9P109 453 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 ARHGAP26Q9UNA1 814 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 CTNND2Q9UQB3 1225 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 FRMD4BQ9Y2L6 1034 aa17.14■□□□□ 0.33
SC5D-209ENST00000534455 TRIM49BA6NDI0 452 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 RNF40O75150 1001 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 NFATC1O95644 943 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 EGFP01133 1207 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 TRIM21P19474 475 aaKnown RBP17.13■□□□□ 0.33
SC5D-209ENST00000534455 USP46P62068 366 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 NOP14P78316 857 aaKnown RBP17.13■□□□□ 0.33
SC5D-209ENST00000534455 SRSF5Q13243 272 aaKnown RBP17.13■□□□□ 0.33
SC5D-209ENST00000534455 NCOA4Q13772 614 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 WDR5BQ86VZ2 330 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 CD101Q93033 1021 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 CHFRQ96EP1 664 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 TNIP3Q96KP6 325 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 DPEP3Q9H4B8 488 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 C2orf42Q9NWW7 574 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 DLL3Q9NYJ7 618 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 OBSL1O75147 1896 aa17.13■□□□□ 0.33
SC5D-209ENST00000534455 ZNF840PA6NDX5 716 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 LRRIQ3A6PVS8 624 aaPredicted RBP17.12■□□□□ 0.33
SC5D-209ENST00000534455 CALUO43852 315 aaPredicted RBP17.12■□□□□ 0.33
SC5D-209ENST00000534455 LRP3O75074 770 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 LETM1O95202 739 aaPredicted RBP17.12■□□□□ 0.33
SC5D-209ENST00000534455 NR3C1P04150 777 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 CCDC192P0DO97 292 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 TAF10Q12962 218 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 EML3Q32P44 896 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 CEP135Q66GS9 1140 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 KLHL10Q6JEL2 608 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 SCARA5Q6ZMJ2 495 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 SLC9A9Q8IVB4 645 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 NUP93Q8N1F7 819 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 MLKLQ8NB16 471 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 PARD3BQ8TEW8 1205 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 TTLL2Q9BWV7 592 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 GTPBP4Q9BZE4 634 aaKnown RBP17.12■□□□□ 0.33
SC5D-209ENST00000534455 ZNF518BQ9C0D4 1074 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 XYLT2Q9H1B5 865 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 SMYD3Q9H7B4 428 aa17.12■□□□□ 0.33
SC5D-209ENST00000534455 CEP250Q9BV73 2442 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 LEFTY2O00292 366 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 CLDN5O00501 218 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 PDXKO00764 312 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 SLC9A3R1O14745 358 aaPredicted RBP17.11■□□□□ 0.33
SC5D-209ENST00000534455 RTN3O95197 1032 aaPredicted RBP17.11■□□□□ 0.33
SC5D-209ENST00000534455 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 TCF3P15923 654 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 YWHAQP27348 245 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 PXNP49023 591 aaPredicted RBP17.11■□□□□ 0.33
SC5D-209ENST00000534455 SGSM1Q2NKQ1 1148 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 PKN3Q6P5Z2 889 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 DDX42Q86XP3 938 aaKnown RBP eCLIP17.11■□□□□ 0.33
SC5D-209ENST00000534455 PDZD8Q8NEN9 1154 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 RPLP0P6Q8NHW5 317 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 NELFBQ8WX92 580 aa17.11■□□□□ 0.33
SC5D-209ENST00000534455 ACDQ96AP0 544 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms