RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 FAM171A2A8MVW0 826 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 FAM227AF5H4B4 570 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 AKR1B10O60218 316 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 EIF3JO75822 258 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 KLHL18O94889 574 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 LUC7L3O95232 432 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 IFIT2P09913 472 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 LTA4HP09960 611 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 ACTN1P12814 892 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 ADSLP30566 484 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 CSRP3P50461 194 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 CACNB3P54284 484 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 MEF2AQ02078 507 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 CFHR1Q03591 330 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 TEFQ10587 303 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 TOP3AQ13472 1001 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 SEMA5AQ13591 1074 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 UBE3CQ15386 1083 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 MAN2A1Q16706 1144 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 KIAA0753Q2KHM9 967 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 SPECC1Q5M775 1068 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 PRAMEF19Q5SWL8 479 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 TRIM68Q6AZZ1 485 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 CCDC149Q6ZUS6 474 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 SPICE1Q8N0Z3 855 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 GPRC5AQ8NFJ5 357 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 PLBD2Q8NHP8 589 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 PARD3BQ8TEW8 1205 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 ARPC5LQ9BPX5 153 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 C7orf25Q9BPX7 421 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 TAGLN3Q9UI15 199 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 ZNF112Q9UJU3 913 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 NEUROG3Q9Y4Z2 214 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 PCDHGB6Q9Y5F9 930 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 F8P00451 2351 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 MAPK8IP3Q9UPT6 1336 aa5.38□□□□□ -1.55
ECHDC1-223ENST00000534442 CSMD1Q96PZ7 3565 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 ADGRG4Q8IZF6 3080 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 ATG2AQ2TAZ0 1938 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 LRRC14BA6NHZ5 514 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 SEMA7AO75326 666 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 FSBPO95073 299 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 CD4P01730 458 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 MYL3P08590 195 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 SNRPA1P09661 255 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 RARBP10826 455 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 JUNBP17275 347 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 IL13P35225 146 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 HTR3AP46098 478 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 NOVA1P51513 510 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 FAM193AP78312 1265 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 MORC3Q14149 939 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 LPAL2Q16609 132 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 ANO6Q4KMQ2 910 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 C19orf54Q5BKX5 351 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 TRMT10BQ6PF06 316 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 LARP4Q71RC2 724 aaKnown RBP eCLIP5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 TAS1R1Q7RTX1 841 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 MORC1Q86VD1 984 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 UNC5BQ8IZJ1 945 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 MSL3Q8N5Y2 521 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 NUDT10Q8NFP7 164 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 KLHDC4Q8TBB5 520 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 SNX33Q8WV41 574 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 ATRIPQ8WXE1 791 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 RAB24Q969Q5 203 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 RGMAQ96B86 450 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 NUDT11Q96G61 164 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 ELAC2Q9BQ52 826 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 ERVK-5Q9HDB9 667 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 TRMT112Q9UI30 125 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 KLK13Q9UKR3 277 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 POLHQ9Y253 713 aa5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 USP9YO00507 2555 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 SIPA1L3O60292 1781 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-223ENST00000534442 MTORP42345 2549 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 LAMA1P25391 3075 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 CAPN8A6NHC0 703 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 SGTAO43765 313 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 PRAMEF4O60810 478 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 LRP3O75074 770 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 CYP7B1O75881 506 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 FTLP02792 175 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 ZNF28P17035 718 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 ATF7P17544 494 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 ETV4P43268 484 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 ALDH5A1P51649 535 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 HK3P52790 923 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 LIMK1P53667 647 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 DLG4P78352 724 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 COASYQ13057 564 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 TARDBPQ13148 414 aaKnown RBP eCLIP5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 ADAM15Q13444 863 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 GPM6BQ13491 265 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 LY6DQ14210 128 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 SF3B3Q15393 1217 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 CSRP2Q16527 193 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 MLANAQ16655 118 aa5.36□□□□□ -1.55
ECHDC1-223ENST00000534442 MST1LQ2TV78 715 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms