RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 NIF3L1Q9GZT8 377 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 PCMTD2Q9NV79 361 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 ZNF214Q9UL59 606 aaPredicted RBP20.2■□□□□ 0.82
CAPN1-226ENST00000533820 HAUS5O94927 633 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 SMAD1Q15797 465 aaKnown RBP20.2■□□□□ 0.82
CAPN1-226ENST00000533820 C1orf228Q6PIY5 440 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 TRIM50Q86XT4 487 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 NAT8LQ8N9F0 302 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 DCAKDQ8WVC6 231 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 INPP5DQ92835 1189 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 CPXM1Q96SM3 734 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 PPP1R16BQ96T49 567 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 MECRQ9BV79 373 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 DHX33Q9H6R0 707 aaKnown RBP20.2■□□□□ 0.82
CAPN1-226ENST00000533820 ACSS3Q9H6R3 686 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 ZNF395Q9H8N7 513 aaPredicted RBP20.2■□□□□ 0.82
CAPN1-226ENST00000533820 CNTN6Q9UQ52 1028 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 C2CD2LO14523 706 aa20.19■□□□□ 0.82
CAPN1-226ENST00000533820 KDELR1P24390 212 aa20.19■□□□□ 0.82
CAPN1-226ENST00000533820 PTPN4P29074 926 aa20.19■□□□□ 0.82
CAPN1-226ENST00000533820 ARFIP2P53365 341 aa20.19■□□□□ 0.82
CAPN1-226ENST00000533820 TRIM56Q9BRZ2 755 aaKnown RBP20.19■□□□□ 0.82
CAPN1-226ENST00000533820 TRIM55Q9BYV6 548 aa20.19■□□□□ 0.82
CAPN1-226ENST00000533820 DDX56Q9NY93 547 aaKnown RBP20.19■□□□□ 0.82
CAPN1-226ENST00000533820 MARCOQ9UEW3 520 aaPredicted RBP20.19■□□□□ 0.82
CAPN1-226ENST00000533820 KBTBD13C9JR72 458 aa20.19■□□□□ 0.82
CAPN1-226ENST00000533820 SLC25A11Q02978 314 aaKnown RBP20.19■□□□□ 0.82
CAPN1-226ENST00000533820 SLC45A4Q5BKX6 768 aa20.19■□□□□ 0.82
CAPN1-226ENST00000533820 ACBD5Q5T8D3 534 aaPredicted RBP20.19■□□□□ 0.82
CAPN1-226ENST00000533820 LRRC38Q5VT99 294 aa20.19■□□□□ 0.82
CAPN1-226ENST00000533820 DARS2Q6PI48 645 aaKnown RBP20.19■□□□□ 0.82
CAPN1-226ENST00000533820 RGS9BPQ6ZS82 235 aa20.19■□□□□ 0.82
CAPN1-226ENST00000533820 TMEM120AQ9BXJ8 343 aa20.19■□□□□ 0.82
CAPN1-226ENST00000533820 BRWD3Q6RI45 1802 aa20.19■□□□□ 0.82
CAPN1-226ENST00000533820 NFASCO94856 1347 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 SPATA31C2B4DYI2 1134 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 PLSCR1O15162 318 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 MAFGO15525 162 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 KITP10721 976 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 ARL2P36404 184 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 BACE1P56817 501 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 MUM1Q2TAK8 710 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 ADGRD1Q6QNK2 874 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 BANPQ8N9N5 519 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 RNF149Q8NC42 400 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 WRNIP1Q96S55 665 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 OCEL1Q9H607 264 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 CYLDQ9NQC7 956 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 ADGRA2Q96PE1 1338 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 FAM237BA0A1B0GVD1 139 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 GYG2O15488 501 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 KPNB1Q14974 876 aaKnown RBP20.18■□□□□ 0.82
CAPN1-226ENST00000533820 CCDC142Q17RM4 750 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 PRPF39Q86UA1 669 aaKnown RBP20.18■□□□□ 0.82
CAPN1-226ENST00000533820 RTKN2Q8IZC4 609 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 VPS52Q8N1B4 723 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 PPM1NQ8N819 430 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 MCUR1Q96AQ8 359 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 SLC13A1Q9BZW2 595 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 HMGXB4Q9UGU5 601 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 TCRBV9S1A1TA0A576 114 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 KRT36O76013 467 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 INHBAP08476 426 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 DPEP1P16444 411 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 RCN1Q15293 331 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 DUOXA2Q1HG44 320 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 CTC1Q2NKJ3 1217 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 BRSK2Q8IWQ3 736 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 ZNF276Q8N554 614 aa20.18■□□□□ 0.82
CAPN1-226ENST00000533820 MIPP30301 263 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 IRX4P78413 519 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 MAP3K10Q02779 954 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 HADHQ16836 314 aaKnown RBP20.17■□□□□ 0.82
CAPN1-226ENST00000533820 TMEM192Q8IY95 271 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 ASCC2Q9H1I8 757 aaPredicted RBP20.17■□□□□ 0.82
CAPN1-226ENST00000533820 E5RJQ4 531 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 F5H423 210 aaPredicted RBP20.17■□□□□ 0.82
CAPN1-226ENST00000533820 H7C0C1 242 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 ATP5OP48047 213 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 BMPR2Q13873 1038 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 KLHL38Q2WGJ6 581 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 ALYREFQ86V81 257 aaKnown RBP20.17■□□□□ 0.82
CAPN1-226ENST00000533820 UBA3Q8TBC4 463 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 GPATCH2LQ9NWQ4 482 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 HEY1Q9Y5J3 304 aa20.17■□□□□ 0.82
CAPN1-226ENST00000533820 B4GALT5O43286 388 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 ADCY3O60266 1144 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 WFS1O76024 890 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 MYL2P10916 166 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 ANO7Q6IWH7 933 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 CDHR3Q6ZTQ4 885 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 MZB1Q8WU39 189 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 TRAPPC12Q8WVT3 735 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 NLRP4Q96MN2 994 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 RBM47A0AV96 593 aaKnown RBP20.16■□□□□ 0.82
CAPN1-226ENST00000533820 MCF2LO15068 1137 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 ERBB2P04626 1255 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 DPYSL3Q14195 570 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 RINLQ6ZS11 566 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 BBS12Q6ZW61 710 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms