RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 TSPAN16Q9UKR8 245 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 GOLGB1Q14789 3259 aaKnown RBP12.51□□□□□ -0.41
ATM-222ENST00000533733 MDM4O15151 490 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 TM9SF1O15321 606 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 XPOTO43592 962 aaKnown RBP12.51□□□□□ -0.41
ATM-222ENST00000533733 GJB1P08034 283 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 GSTA2P09210 222 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 ZSCAN5DPP0CG00 497 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 PDGFRAP16234 1089 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 ZFXP17010 805 aaPredicted RBP12.51□□□□□ -0.41
ATM-222ENST00000533733 ADORA2AP29274 412 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 RPL22P35268 128 aaKnown RBP12.51□□□□□ -0.41
ATM-222ENST00000533733 YARSP54577 528 aaKnown RBP12.51□□□□□ -0.41
ATM-222ENST00000533733 DPYSL3Q14195 570 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 PDK4Q16654 411 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 DUSP28Q4G0W2 176 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 TMEM63BQ5T3F8 832 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 ARHGAP17Q68EM7 881 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 OR6B2Q6IFH4 312 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 PALM2Q8IXS6 379 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 KIAA0319LQ8IZA0 1049 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 BEST2Q8NFU1 509 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 SPATA18Q8TC71 538 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 SLC10A4Q96EP9 437 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 PWWP2AQ96N64 755 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 CYTH2Q99418 400 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 ZNF670Q9BS34 389 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 DHRS4Q9BTZ2 278 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 SLC4A5Q9BY07 1137 aa12.51□□□□□ -0.41
ATM-222ENST00000533733 GCOM2Q9BZD3 368 aaPredicted RBP12.51□□□□□ -0.41
ATM-222ENST00000533733 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.51□□□□□ -0.41
ATM-222ENST00000533733 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.51□□□□□ -0.41
ATM-222ENST00000533733 CLUHO75153 1309 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 IQANK1A0A1B0GTG1 560 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 POC1B-GALNT4F8VUJ3 575 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 ETS1P14921 441 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 CREB1P16220 341 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 TAC1P20366 129 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 ALDH3A1P30838 453 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 SDC4P31431 198 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 SLC8A1P32418 973 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 CDH6P55285 790 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 RIPK1Q13546 671 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 LRRC14Q15048 493 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 GRIK4Q16099 956 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 SNCBQ16143 134 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 DGKDQ16760 1214 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 SMTNL2Q2TAL5 461 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 GALNTL6Q49A17 601 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 IQSEC1Q6DN90 963 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 SLC27A1Q6PCB7 646 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 TMEM110Q86TL2 294 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 CDR2LQ86X02 465 aaPredicted RBP12.5□□□□□ -0.41
ATM-222ENST00000533733 EMC1Q8N766 993 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 CCDC63Q8NA47 563 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 ZNF398Q8TD17 642 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 RXFP2Q8WXD0 754 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 LRRC39Q96DD0 335 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 RNF157Q96PX1 679 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 TACO1Q9BSH4 297 aaKnown RBP12.5□□□□□ -0.41
ATM-222ENST00000533733 CALN1Q9BXU9 219 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 PITPNM3Q9BZ71 974 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 KATNBL1Q9H079 304 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 R3HDMLQ9H3Y0 253 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 ABHD16BQ9H3Z7 469 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 SLC5A4Q9NY91 659 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
ATM-222ENST00000533733 BCLAF3A2AJT9 711 aaKnown RBP12.49□□□□□ -0.41
ATM-222ENST00000533733 FAM155BO75949 473 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 CD4P01730 458 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 EPHX2P34913 555 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 MSH2P43246 934 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 PTPN9P43378 593 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 ACADSBP45954 432 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 GTF2A2P52657 109 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 DYNLT1P63172 113 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 SLC6A3Q01959 620 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 MPP2Q14168 576 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 KRT81Q14533 505 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 PKDCCQ504Y2 493 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 KCNT1Q5JUK3 1230 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 NOTUMQ6P988 496 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 CYB5D1Q6P9G0 228 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 DARS2Q6PI48 645 aaKnown RBP12.49□□□□□ -0.41
ATM-222ENST00000533733 FAM183BPQ6ZVS7 135 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
ATM-222ENST00000533733 ANKRD23Q86SG2 305 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 PARP9Q8IXQ6 854 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 LRRC8CQ8TDW0 803 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 FBF1Q8TES7 1133 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 HSPH1Q92598 858 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 ACSF2Q96CM8 615 aaPredicted RBP12.49□□□□□ -0.41
ATM-222ENST00000533733 CPB2Q96IY4 423 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 PNPLA8Q9NP80 782 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.49□□□□□ -0.41
ATM-222ENST00000533733 PCSK1NQ9UHG2 260 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 XPO7Q9UIA9 1087 aaKnown RBP12.49□□□□□ -0.41
ATM-222ENST00000533733 SCN1AP35498 2009 aa12.49□□□□□ -0.41
ATM-222ENST00000533733 APOL1O14791 398 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms