RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 SLC22A12Q96S37 553 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 CYP2S1Q96SQ9 504 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 NT5C1AQ9BXI3 368 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 APOBEC3GQ9HC16 384 aaKnown RBP23.64■■□□□ 1.37
BEST1-207ENST00000533521 METTL14Q9HCE5 456 aaKnown RBP23.64■■□□□ 1.37
BEST1-207ENST00000533521 TRPC7Q9HCX4 862 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 HPS4Q9NQG7 708 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 MYH10P35580 1976 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 USP34Q70CQ2 3546 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 C2orf78A6NCI8 922 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 OAS1P00973 400 aaKnown RBP23.63■■□□□ 1.37
BEST1-207ENST00000533521 TAF10Q12962 218 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 PPP2R5DQ14738 602 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 OSCP1Q8WVF1 389 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 EXOC4Q96A65 974 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 CEP63Q96MT8 703 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 HNRNPABQ99729 332 aaKnown RBP23.63■■□□□ 1.37
BEST1-207ENST00000533521 MED10Q9BTT4 135 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 PNPLA8Q9NP80 782 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 RAB20Q9NX57 234 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 PCDHGA2Q9Y5H1 932 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 FAM186AA6NE01 2351 aa23.63■■□□□ 1.37
BEST1-207ENST00000533521 PMM2O15305 246 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 CILPO75339 1184 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 PAPSS2O95340 614 aaPredicted RBP23.62■■□□□ 1.37
BEST1-207ENST00000533521 TUBP50607 506 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 TNK2Q07912 1038 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 MTAPQ13126 283 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 TXNDC11Q6PKC3 985 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 SPEM1Q8N4L4 309 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 RIN3Q8TB24 985 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 ATP2A3Q93084 1043 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 KCNK16Q96T55 309 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 CHMP5Q9NZZ3 219 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 ARMCX3Q9UH62 379 aaPredicted RBP23.62■■□□□ 1.37
BEST1-207ENST00000533521 MAN1B1Q9UKM7 699 aa23.62■■□□□ 1.37
BEST1-207ENST00000533521 TRDMT1O14717 391 aaKnown RBP23.61■■□□□ 1.37
BEST1-207ENST00000533521 AP1G2O75843 785 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 SOX9P48436 509 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 CCR3P51677 355 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 PMS1P54277 932 aaKnown RBP23.61■■□□□ 1.37
BEST1-207ENST00000533521 CCINQ13939 588 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 ASCL5Q7RTU5 278 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 FILIP1Q7Z7B0 1213 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 DDX42Q86XP3 938 aaKnown RBP eCLIP23.61■■□□□ 1.37
BEST1-207ENST00000533521 ZBTB44Q8NCP5 570 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 SLC2A14Q8TDB8 520 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 SH3RF2Q8TEC5 729 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 EEF2KMTQ96G04 330 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 DUSP9Q99956 384 aaKnown RBP23.61■■□□□ 1.37
BEST1-207ENST00000533521 FBXO44Q9H4M3 255 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 HMGXB4Q9UGU5 601 aa23.61■■□□□ 1.37
BEST1-207ENST00000533521 ZDHHC11BP0C7U3 371 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 NRLP54845 237 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 UBE2HP62256 183 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 MORC3Q14149 939 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 TMEM196Q5HYL7 178 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 WDR44Q5JSH3 913 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 CPA6Q8N4T0 437 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 ZMIZ2Q8NF64 920 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 WHAMMQ8TF30 809 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 SEMA4DQ92854 862 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 ERCC4Q92889 916 aaPredicted RBP23.6■■□□□ 1.37
BEST1-207ENST00000533521 ELMO3Q96BJ8 720 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 SMOQ99835 787 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 EBF3Q9H4W6 596 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 KRT82Q9NSB4 513 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 ZSCAN32Q9NX65 697 aa23.6■■□□□ 1.37
BEST1-207ENST00000533521 DUS2Q9NX74 493 aaKnown RBP23.6■■□□□ 1.37
BEST1-207ENST00000533521 PTPRZ1P23471 2315 aaPredicted RBP23.6■■□□□ 1.37
BEST1-207ENST00000533521 GADD45BO75293 160 aaPredicted RBP23.59■■□□□ 1.37
BEST1-207ENST00000533521 FAM200BP0CF97 657 aa23.59■■□□□ 1.37
BEST1-207ENST00000533521 SLC5A3P53794 718 aa23.59■■□□□ 1.37
BEST1-207ENST00000533521 NR1H3Q13133 447 aa23.59■■□□□ 1.37
BEST1-207ENST00000533521 C12orf29Q8N999 325 aa23.59■■□□□ 1.37
BEST1-207ENST00000533521 TRIML1Q8N9V2 468 aa23.59■■□□□ 1.37
BEST1-207ENST00000533521 FBXO32Q969P5 355 aa23.59■■□□□ 1.37
BEST1-207ENST00000533521 SLC35C1Q96A29 364 aa23.59■■□□□ 1.37
BEST1-207ENST00000533521 CYFIP2Q96F07 1278 aa23.59■■□□□ 1.37
BEST1-207ENST00000533521 RNF38Q9H0F5 515 aa23.59■■□□□ 1.37
BEST1-207ENST00000533521 ECT2Q9H8V3 914 aa23.59■■□□□ 1.37
BEST1-207ENST00000533521 BICDL2A1A5D9 508 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 OTOL1A6NHN0 477 aaPredicted RBP23.58■■□□□ 1.37
BEST1-207ENST00000533521 SLC9A3R1O14745 358 aaPredicted RBP23.58■■□□□ 1.37
BEST1-207ENST00000533521 LILRB5O75023 590 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 LMNAP02545 664 aaKnown RBP23.58■■□□□ 1.37
BEST1-207ENST00000533521 TDGF1P13385 188 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 CCDC130P13994 396 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 BMP6P22004 513 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 HOXA6P31267 233 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 IFNAR2P48551 515 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 CSTF1Q05048 431 aaKnown RBP23.58■■□□□ 1.37
BEST1-207ENST00000533521 EML3Q32P44 896 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 TTI2Q6NXR4 508 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 TWNKQ96RR1 684 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 MMRN2Q9H8L6 949 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 MYO15AQ9UKN7 3530 aa23.58■■□□□ 1.37
BEST1-207ENST00000533521 TRIM49BA6NDI0 452 aa23.57■■□□□ 1.36
BEST1-207ENST00000533521 PPP1R3GB7ZBB8 358 aa23.57■■□□□ 1.36
BEST1-207ENST00000533521 LEFTY2O00292 366 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms