RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 POLR2FP61218 127 aaKnown RBP8.77□□□□□ -1
NEDD8-207ENST00000533242 CASP8Q14790 479 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 ENOX2Q16206 610 aaKnown RBP8.77□□□□□ -1
NEDD8-207ENST00000533242 ZNF568Q3ZCX4 644 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 Q6ZS52 159 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 SFR1Q86XK3 245 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 GAB3Q8WWW8 586 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 ZMAT2Q96NC0 199 aaKnown RBP8.77□□□□□ -1
NEDD8-207ENST00000533242 ACO2Q99798 780 aaKnown RBP8.77□□□□□ -1
NEDD8-207ENST00000533242 RUSC1Q9BVN2 902 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 LSM14BQ9BX40 385 aaKnown RBP8.77□□□□□ -1
NEDD8-207ENST00000533242 OXCT2Q9BYC2 517 aaPredicted RBP8.77□□□□□ -1
NEDD8-207ENST00000533242 TMEM134Q9H6X4 195 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 PTPRHQ9HD43 1115 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 OBP2AQ9NY56 170 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 CNTN3Q9P232 1028 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 YIPF1Q9Y548 306 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 F5P12259 2224 aa8.77□□□□□ -1
NEDD8-207ENST00000533242 DENND4CQ5VZ89 1909 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 KIAA1549LQ6ZVL6 1849 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 SLC38A8A6NNN8 435 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 SFI1A8K8P3 1242 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 AXIN1O15169 862 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 AKR1B10O60218 316 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 PRPF6O94906 941 aaKnown RBP8.77□□□□□ -1.01
NEDD8-207ENST00000533242 IPO7O95373 1038 aaKnown RBP8.77□□□□□ -1.01
NEDD8-207ENST00000533242 SOX9P48436 509 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 ARID5AQ03989 594 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 SPA17Q15506 151 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 WDR93Q6P2C0 686 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 RNF19BQ6ZMZ0 732 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 CACNA2D4Q7Z3S7 1137 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 TMC8Q8IU68 726 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 CCDC65Q8IXS2 484 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 ZC3H3Q8IXZ2 948 aaKnown RBP8.77□□□□□ -1.01
NEDD8-207ENST00000533242 CEP120Q8N960 986 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 ACAP3Q96P50 834 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 TSG101Q99816 390 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 PACSIN1Q9BY11 444 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 MRPL4Q9BYD3 311 aaKnown RBP8.77□□□□□ -1.01
NEDD8-207ENST00000533242 ARRDC1-AS1Q9H2J1 176 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 DEF6Q9H4E7 631 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 SLITRK6Q9H5Y7 841 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 AJAP1Q9UKB5 411 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-207ENST00000533242 SNX12Q9UMY4 172 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 MYH11P35749 1972 aa8.77□□□□□ -1.01
NEDD8-207ENST00000533242 CCDC163A0A0D9SF12 145 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 AKAP3O75969 853 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 FGF19O95750 216 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 PROS1P07225 676 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 CPB1P15086 417 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 SLC9A1P19634 815 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 NR2F2P24468 414 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 WEE1P30291 646 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 RAP1GAPP47736 663 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 CASP4P49662 377 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 MARSP56192 900 aaKnown RBP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 ADAM9Q13443 819 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 SF3A2Q15428 464 aaKnown RBP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 KCTD19Q17RG1 926 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 TDRD12Q587J7 1177 aaKnown RBP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 STPG1Q5TH74 334 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 FOXR2Q6PJQ5 311 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 TXNDC11Q6PKC3 985 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 HAUS6Q7Z4H7 955 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 C18orf25Q96B23 403 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 TLR10Q9BXR5 811 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 GANQ9H2C0 597 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 BHMT2Q9H2M3 363 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 PCDHGA5Q9Y5G8 931 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 TSC2P49815 1807 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 SPTBN2O15020 2390 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 A0A087X0T9 212 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 A0A1W2PRU2 124 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 ANO9A1A5B4 782 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 DPYSL4O14531 572 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 PHACTR2O75167 634 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 VNN2O95498 520 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 FGFR1OPO95684 399 aaKnown RBP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 KRT18P05783 430 aaKnown RBP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 FAM228BP0C875 321 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 PROZP22891 400 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 MAGEA1P43355 309 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 EPHB3P54753 998 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 OSTNP61366 133 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 KCNH2Q12809 1159 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 CCINQ13939 588 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 PON2Q15165 354 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 EPM2AIP1Q7L775 607 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 HDXQ7Z353 690 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 ARID3BQ8IVW6 561 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 SYT2Q8N9I0 419 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 MS4A14Q96JA4 679 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 CEP63Q96MT8 703 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 LRRC27Q9C0I9 530 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 C2orf42Q9NWW7 574 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 DMGDHQ9UI17 866 aaKnown RBP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 ASB3Q9Y575 518 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.76□□□□□ -1.01
NEDD8-207ENST00000533242 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms