RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 CNPY3Q9BT09 278 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 FRMD8P1Q9BZ68 369 aaPredicted RBP16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 TRABDQ9H4I3 376 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 GBA2Q9HCG7 927 aaPredicted RBP16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 SETD4Q9NVD3 440 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 PNMA3Q9UL41 463 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 GRID1Q9ULK0 1009 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 ZMYND8Q9ULU4 1186 aaPredicted RBP16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 HES2Q9Y543 173 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 BTBD19C9JJ37 291 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 GABBR2O75899 941 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 STAU1O95793 577 aaKnown RBP16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 IL4RP24394 825 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 GRM5P41594 1212 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 CCNA1P78396 465 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 ATP11AP98196 1134 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 DPYSL3Q14195 570 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 SUGP1Q8IWZ8 645 aaKnown RBP16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 KHSRPQ92945 711 aaKnown RBP eCLIP16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 RSAD1Q9HA92 442 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 KLC4Q9NSK0 619 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 SNTG2Q9NY99 539 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 NPTXRO95502 500 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 MMP3P08254 477 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 KRT15P19012 456 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 XRCC4Q13426 336 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 KYAT1Q16773 422 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 GOLGA7BQ2TAP0 167 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 PKDCCQ504Y2 493 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 SYCP2LQ5T4T6 812 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 DPY19L2Q6NUT2 758 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 PPP1R21Q6ZMI0 780 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 C3orf62Q6ZUJ4 267 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 ACOT1Q86TX2 421 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 SCUBE3Q8IX30 993 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 FBXO36Q8NEA4 188 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 PYROXD1Q8WU10 500 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 SPOCK2Q92563 424 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 SGSM3Q96HU1 749 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 PAIP2Q9BPZ3 127 aaKnown RBP16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 MAK16Q9BXY0 300 aaKnown RBP16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 EIF2AQ9BY44 585 aaKnown RBP16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 FAM49BQ9NUQ9 324 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 PRKAG3Q9UGI9 489 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 GJD2Q9UKL4 321 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 SNX9Q9Y5X1 595 aa16.04■□□□□ 0.16
CACNA1E-208ENST00000533229 E7ESA3 106 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 MCF2LO15068 1137 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 HCRTO43612 131 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 DNAJC8O75937 253 aaPredicted RBP16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 RPA3P35244 121 aaPredicted RBP16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 ARL4CP56559 192 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 BASP1P80723 227 aaKnown RBP16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 ZC3H12AQ5D1E8 599 aaKnown RBP16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 EFHC2Q5JST6 749 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 OLFML1Q6UWY5 402 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 SPATA21Q7Z572 469 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 IGDCC3Q8IVU1 814 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 ADAMTS10Q9H324 1103 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 ZNF408Q9H9D4 720 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 GPATCH2LQ9NWQ4 482 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 TUBGCP4Q9UGJ1 667 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 XPO7Q9UIA9 1087 aaKnown RBP16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 PRPF4O43172 522 aaKnown RBP eCLIP16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 UBOX5O94941 541 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 MGAT5Q09328 741 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 NR1H3Q13133 447 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 NOMO1Q15155 1222 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 GLRA4Q5JXX5 417 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 FAM47EQ6ZV65 393 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 FBF1Q8TES7 1133 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 C18orf25Q96B23 403 aaPredicted RBP16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 B3GNT5Q9BYG0 378 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 FAM49AQ9H0Q0 323 aaPredicted RBP16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 KIAA1257Q9ULG3 409 aa16.03■□□□□ 0.16
CACNA1E-208ENST00000533229 TYROBPO43914 113 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 SUN1O94901 812 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 GEMIN4P57678 1058 aaKnown RBP16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 IL9RQ01113 521 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 SLC1A5Q15758 541 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 CA9Q16790 459 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 BBS9Q3SYG4 887 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 DUSP28Q4G0W2 176 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 SCYL2Q6P3W7 929 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 CYB5D1Q6P9G0 228 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 C1orf228Q6PIY5 440 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 GPR142Q7Z601 462 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 DPP9Q86TI2 863 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 ZNF410Q86VK4 478 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 NT5DC4Q86YG4 428 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 LRRN4Q8WUT4 740 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 SLC35F5Q8WV83 523 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 MAML3Q96JK9 1138 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 RMDN2Q96LZ7 410 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 RNF157Q96PX1 679 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 SPON1Q9HCB6 807 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 PSMC3IPQ9P2W1 217 aaPredicted RBP16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 SLC24A2Q9UI40 661 aa16.02■□□□□ 0.16
CACNA1E-208ENST00000533229 NDC80O14777 642 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms