RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 NCOA4Q13772 614 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 CACNA2D4Q7Z3S7 1137 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 PLEKHO2Q8TD55 490 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 PARD3BQ8TEW8 1205 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 GAB3Q8WWW8 586 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 ELMO3Q96BJ8 720 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 HHIPQ96QV1 700 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 RTKNQ9BST9 563 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 TTLL2Q9BWV7 592 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 RNF38Q9H0F5 515 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 XYLT2Q9H1B5 865 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 CPQQ9Y646 472 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 ATP8B3O60423 1300 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 MYO16Q9Y6X6 1858 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 DCDC2BA2VCK2 349 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 ACTN4O43707 911 aaKnown RBP18.94■□□□□ 0.62
PCF11-206ENST00000533018 MBL2P11226 248 aaPredicted RBP18.94■□□□□ 0.62
PCF11-206ENST00000533018 TCF3P15923 654 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 PFKFB1P16118 471 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 YWHAQP27348 245 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 SEC13P55735 322 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 ZXDBP98169 803 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 CSRP2Q16527 193 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 PRR23CQ6ZRP0 262 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 FILIP1Q7Z7B0 1213 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 NUP93Q8N1F7 819 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 CAMKK1Q8N5S9 505 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 KIAA0895Q8NCT3 520 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 SPATA32Q96LK8 384 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 MYOFQ9NZM1 2061 aa18.94■□□□□ 0.62
PCF11-206ENST00000533018 EML5Q05BV3 1969 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 CCDC163A0A0D9SF12 145 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 SCAMP3O14828 347 aaKnown RBP18.93■□□□□ 0.62
PCF11-206ENST00000533018 P4HA1P13674 534 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 CMA1P23946 247 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 SLC7A9P82251 487 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 CCDC26Q8TAB7 109 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 FBXO32Q969P5 355 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 ACDQ96AP0 544 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 TNIP3Q96KP6 325 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 KCNK16Q96T55 309 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 ARRDC1-AS1Q9H2J1 176 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 TMEM30AQ9NV96 361 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 FRMD4BQ9Y2L6 1034 aa18.93■□□□□ 0.62
PCF11-206ENST00000533018 CALUO43852 315 aaPredicted RBP18.92■□□□□ 0.62
PCF11-206ENST00000533018 RTN3O95197 1032 aaPredicted RBP18.92■□□□□ 0.62
PCF11-206ENST00000533018 C4BPAP04003 597 aaKnown RBP18.92■□□□□ 0.62
PCF11-206ENST00000533018 NR3C1P04150 777 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 DLG4P78352 724 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 KRT85P78386 507 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 DMC1Q14565 340 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 CCDC6Q16204 474 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 C2orf27AQ580R0 203 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 SYT13Q7L8C5 426 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 KBTBD6Q86V97 674 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 SLC9A9Q8IVB4 645 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 NETO1Q8TDF5 533 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 CCDC47Q96A33 483 aaKnown RBP18.92■□□□□ 0.62
PCF11-206ENST00000533018 VRTNQ9H8Y1 702 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 DMAC2Q9NW81 257 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 CFAP97Q9P2B7 532 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 CHORDC1Q9UHD1 332 aaPredicted RBP18.92■□□□□ 0.62
PCF11-206ENST00000533018 USP25Q9UHP3 1055 aa18.92■□□□□ 0.62
PCF11-206ENST00000533018 PDXKO00764 312 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 SLC9A3R1O14745 358 aaPredicted RBP18.91■□□□□ 0.62
PCF11-206ENST00000533018 GDF9O60383 454 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 AP1G2O75843 785 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 VNN1O95497 513 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 OAS1P00973 400 aaKnown RBP18.91■□□□□ 0.62
PCF11-206ENST00000533018 RPN1P04843 607 aaKnown RBP18.91■□□□□ 0.62
PCF11-206ENST00000533018 SYKP43405 635 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 ORC1Q13415 861 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 SGSM1Q2NKQ1 1148 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 ACOT1Q86TX2 421 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 FAM35AQ86V20 835 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 ADGRG2Q8IZP9 1017 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 PDZD8Q8NEN9 1154 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 SCAMP5Q8TAC9 235 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 EZH1Q92800 747 aaPredicted RBP18.91■□□□□ 0.62
PCF11-206ENST00000533018 CHAMP1Q96JM3 812 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 KCTD10Q9H3F6 313 aa18.91■□□□□ 0.62
PCF11-206ENST00000533018 DMAP1Q9NPF5 467 aaPredicted RBP18.91■□□□□ 0.62
PCF11-206ENST00000533018 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.91■□□□□ 0.626e-10■■■■■ 59.4
PCF11-206ENST00000533018 FOXD2O60548 495 aaPredicted RBP18.9■□□□□ 0.62
PCF11-206ENST00000533018 KIF20AO95235 890 aa18.9■□□□□ 0.62
PCF11-206ENST00000533018 APBB3O95704 486 aa18.9■□□□□ 0.62
PCF11-206ENST00000533018 MYL1P05976 194 aa18.9■□□□□ 0.62
PCF11-206ENST00000533018 DGKEP52429 567 aa18.9■□□□□ 0.62
PCF11-206ENST00000533018 CLDN10P78369 228 aa18.9■□□□□ 0.62
PCF11-206ENST00000533018 DHCR24Q15392 516 aa18.9■□□□□ 0.62
PCF11-206ENST00000533018 AASDHQ4L235 1098 aaPredicted RBP18.9■□□□□ 0.62
PCF11-206ENST00000533018 TTC30AQ86WT1 665 aa18.9■□□□□ 0.62
PCF11-206ENST00000533018 DDX42Q86XP3 938 aaKnown RBP eCLIP18.9■□□□□ 0.62
PCF11-206ENST00000533018 C12orf50Q8NA57 414 aaPredicted RBP18.9■□□□□ 0.62
PCF11-206ENST00000533018 SMARCD1Q96GM5 515 aa18.9■□□□□ 0.62
PCF11-206ENST00000533018 NACA2Q9H009 215 aa18.9■□□□□ 0.62
PCF11-206ENST00000533018 SDCBP2Q9H190 292 aa18.9■□□□□ 0.62
PCF11-206ENST00000533018 KIAA1549LQ6ZVL6 1849 aa18.9■□□□□ 0.62
PCF11-206ENST00000533018 LAMA1P25391 3075 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms