RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 FAN1Q9Y2M0 1017 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ZDHHC9Q9Y397 364 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 SF3B1O75533 1304 aaKnown RBP eCLIP1.89□□□□□ -2.112e-6■■■■■ 97.6
KNL1-211ENST00000533001 K7ENP7 123 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 TRIM38O00635 465 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PFKFB2O60825 505 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 CLDN1O95832 211 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 SOD1P00441 154 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 CXCL8P10145 99 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 RPS6KB1P23443 525 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 CYP2F1P24903 491 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ZFP36L1Q07352 338 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 SLC14A1Q13336 389 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PRR16Q569H4 304 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 CXorf57Q6NSI4 855 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 INO80CQ6PI98 192 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 MICU3Q86XE3 530 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 GPR161Q8N6U8 529 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 DEFB124Q8NES8 71 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 SCAMP5Q8TAC9 235 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 OSCP1Q8WVF1 389 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 IGFBPL1Q8WX77 278 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ELMO3Q96BJ8 720 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 HHIPQ96QV1 700 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ZNF577Q9BSK1 485 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 KLF16Q9BXK1 252 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 KRT23Q9C075 422 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 MTG2Q9H4K7 406 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 SH3GLB2Q9NR46 395 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ZNF215Q9UL58 517 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 PIN4Q9Y237 131 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 PCDHGB2Q9Y5G2 931 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 TIMM13Q9Y5L4 95 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 FAM237AA0A1B0GTK4 181 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 A0A1W2PQM1 296 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 H0Y8X5 98 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 DGAT1O75907 488 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 P4HBP07237 508 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 GNAT1P11488 350 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 NCAM1P13591 858 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 IGFBP2P18065 325 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 MAOBP27338 520 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 AK2P54819 239 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 MFAP3P55082 362 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 INCA1Q0VD86 236 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 GRIK2Q13002 908 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 NR1D2Q14995 579 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 FAM171A1Q5VUB5 890 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 GET4Q7L5D6 327 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 CABP7Q86V35 215 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PPFIBP1Q86W92 1011 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 RHPN2Q8IUC4 686 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 REXO1Q8N1G1 1221 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 TERB1Q8NA31 727 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 FBXO18Q8NFZ0 1043 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 BRF1Q92994 677 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 BIRC7Q96CA5 298 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PHF12Q96QT6 1004 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 KLC2Q9H0B6 622 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 VPS45Q9NRW7 570 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 MRPL17Q9NRX2 175 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 PCDHB8Q9UN66 801 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 WNT6Q9Y6F9 365 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 B8ZZF3 427 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 SYN3O14994 580 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 B3GAT3O94766 335 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PRKCBP05771 671 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 IL12RB1P42701 662 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 VASPP50552 380 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 CCR3P51677 355 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 CYP4F8P98187 520 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 CYP4A11Q02928 519 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 CTTNQ14247 550 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 MYBPC2Q14324 1141 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 GNPTABQ3T906 1256 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 FUT11Q495W5 492 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ZNF658BQ4V348 819 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 C9orf57Q5W0N0 161 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PAPD7Q5XG87 772 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 TPGS2Q68CL5 300 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PM20D1Q6GTS8 502 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ZPBP2Q6X784 338 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 TMEFF1Q8IYR6 380 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 INPP5DQ92835 1189 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 CHAMP1Q96JM3 812 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 TTC12Q9H892 705 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 CNTN6Q9UQ52 1028 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PPME1Q9Y570 386 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PCDHB7Q9Y5E2 793 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 hCG_1984214I3L0E3 225 aa1.88□□□□□ -2.11
KNL1-211ENST00000533001 DDX39AO00148 427 aaKnown RBP1.88□□□□□ -2.11
KNL1-211ENST00000533001 ANP32CO43423 234 aa1.88□□□□□ -2.11
KNL1-211ENST00000533001 TBX18O95935 607 aa1.88□□□□□ -2.11
KNL1-211ENST00000533001 AXLP30530 894 aa1.88□□□□□ -2.11
KNL1-211ENST00000533001 SFNP31947 248 aa1.88□□□□□ -2.11
KNL1-211ENST00000533001 RAB27AP51159 221 aa1.88□□□□□ -2.11
KNL1-211ENST00000533001 NOVA1P51513 510 aaKnown RBP1.88□□□□□ -2.11
KNL1-211ENST00000533001 RAB6CQ53S08 254 aa1.88□□□□□ -2.11
KNL1-211ENST00000533001 ANKRD45Q5TZF3 282 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms