RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 XPO1O14980 1071 aaKnown RBP13.22□□□□□ -0.29
COPB1-208ENST00000532088 GPR37L1O60883 481 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 MICAL2O94851 1124 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 CYP1A1P04798 512 aaPredicted RBP13.22□□□□□ -0.29
COPB1-208ENST00000532088 SRGAP2BP0DMP2 458 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 PLA2G4AP47712 749 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 RPL34P49207 117 aaKnown RBP13.22□□□□□ -0.29
COPB1-208ENST00000532088 FMO1Q01740 532 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 ARID5AQ03989 594 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 GOLGA7BQ2TAP0 167 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 TTC30AQ86WT1 665 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 TMTC1Q8IUR5 882 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 EFHBQ8N7U6 833 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 ATAD1Q8NBU5 361 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 KREMEN2Q8NCW0 462 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 CCDC112Q8NEF3 446 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 SLC35F5Q8WV83 523 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 CASP10Q92851 521 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 HSFY1Q96LI6 401 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 PPP1R9BQ96SB3 815 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 ACP6Q9NPH0 428 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 KRT82Q9NSB4 513 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 DZANK1Q9NVP4 752 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 COMMD8Q9NX08 183 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 ABI2Q9NYB9 513 aaPredicted RBP13.22□□□□□ -0.29
COPB1-208ENST00000532088 PCDHGC5Q9Y5F6 944 aa13.22□□□□□ -0.29
COPB1-208ENST00000532088 M0QYV0 167 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 CLDN5O00501 218 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 MMEP08473 750 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 HNRNPA1P09651 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
COPB1-208ENST00000532088 GZMAP12544 262 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 CHRNB2P17787 502 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 TNFAIP3P21580 790 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 BDNFP23560 247 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 CYP2F1P24903 491 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 ADORA2BP29275 332 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 GPD2P43304 727 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 SNX16P57768 344 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 DUSP4Q13115 394 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 COL19A1Q14993 1142 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 ASTE1Q2TB18 679 aaPredicted RBP13.21□□□□□ -0.29
COPB1-208ENST00000532088 TDRD12Q587J7 1177 aaKnown RBP13.21□□□□□ -0.29
COPB1-208ENST00000532088 TCEAL5Q5H9L2 206 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 CYP26C1Q6V0L0 522 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 CLEC20AQ6ZU45 233 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 ZNF571Q7Z3V5 609 aaPredicted RBP13.21□□□□□ -0.29
COPB1-208ENST00000532088 ADGRD2Q7Z7M1 963 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 PALB2Q86YC2 1186 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 GLYCTKQ8IVS8 523 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 CCDC170Q8IYT3 715 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 TMEM35BQ8NCS4 154 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 SLC30A5Q8TAD4 765 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 KCTD13Q8WZ19 329 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 PGLYRP2Q96PD5 576 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 NOX5Q96PH1 765 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 LPIN3Q9BQK8 851 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 MIS12Q9H081 205 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 PDCL3Q9H2J4 239 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 CYP4F11Q9HBI6 524 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 ZDHHC7Q9NXF8 308 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 EHD2Q9NZN4 543 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 ARHGAP20Q9P2F6 1191 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 YIPF1Q9Y548 306 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 ASB3Q9Y575 518 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 HCFC2Q9Y5Z7 792 aa13.21□□□□□ -0.29
COPB1-208ENST00000532088 CHD9Q3L8U1 2897 aa13.21□□□□□ -0.3
COPB1-208ENST00000532088 MTCL1Q9Y4B5 1905 aaKnown RBP13.2□□□□□ -0.3
COPB1-208ENST00000532088 SEC24AO95486 1093 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 UNGP13051 313 aaPredicted RBP13.2□□□□□ -0.3
COPB1-208ENST00000532088 ACADSBP45954 432 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 NRIP1P48552 1158 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 NOMO3P69849 1222 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 CENPCQ03188 943 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 PDE4CQ08493 712 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 ADGRE1Q14246 886 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 SLC18A3Q16572 532 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 CCDC142Q17RM4 750 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 MGAT5BQ3V5L5 792 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 RAB41Q5JT25 222 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 CCDC186Q7Z3E2 898 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 SCML4Q8N228 414 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 MSANTD4Q8NCY6 345 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 ZMIZ2Q8NF64 920 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 CMASQ8NFW8 434 aaPredicted RBP13.2□□□□□ -0.3
COPB1-208ENST00000532088 OLIG1Q8TAK6 271 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 SLC20A1Q8WUM9 679 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 SECISBP2LQ93073 1101 aaKnown RBP13.2□□□□□ -0.3
COPB1-208ENST00000532088 SMOQ99835 787 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 CRISPLD1Q9H336 500 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 INSL5Q9Y5Q6 135 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 PLXNA3P51805 1871 aa13.2□□□□□ -0.3
COPB1-208ENST00000532088 LAMA2P24043 3122 aaKnown RBP13.19□□□□□ -0.3
COPB1-208ENST00000532088 HHLA1C9JL84 531 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 PRRG1O14668 218 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 NRDCO43847 1150 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 C8AP07357 584 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 SKILP12757 684 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 GRIK1P39086 918 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms