RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 TCF3P15923 654 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 TRIM21P19474 475 aaKnown RBP20.12■□□□□ 0.81
UBXN1-211ENST00000531056 YWHAQP27348 245 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 ADORA2BP29275 332 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 IFRD2Q12894 506 aaPredicted RBP20.12■□□□□ 0.81
UBXN1-211ENST00000531056 FZD5Q13467 585 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 CLEC20AQ6ZU45 233 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 TRIM59Q8IWR1 403 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 TTC39CQ8N584 583 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 SCAMP5Q8TAC9 235 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 OVCA2Q8WZ82 227 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 CLDN23Q96B33 292 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 CYFIP2Q96F07 1278 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 MSANTD3Q96H12 275 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 SLITRK1Q96PX8 696 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 MED15Q96RN5 788 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 NELL2Q99435 816 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 FAM83CQ9BQN1 747 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 IRF2BPLQ9H1B7 796 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 THG1LQ9NWX6 298 aaKnown RBP20.12■□□□□ 0.81
UBXN1-211ENST00000531056 COMMD8Q9NX08 183 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 GTSE1Q9NYZ3 720 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 RWDD2AQ9UIY3 292 aa20.12■□□□□ 0.81
UBXN1-211ENST00000531056 MRPS17Q9Y2R5 130 aaKnown RBP20.12■□□□□ 0.81
UBXN1-211ENST00000531056 HHLA1C9JL84 531 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 GNA14O95837 355 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 OAS1P00973 400 aaKnown RBP20.11■□□□□ 0.81
UBXN1-211ENST00000531056 FAM200BP0CF97 657 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 SOX9P48436 509 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 PDE6CP51160 858 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 RAD23BP54727 409 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 MAP3K7CLP57077 242 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 TNK2Q07912 1038 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 CUL2Q13617 745 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 ZNF394Q53GI3 561 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 UBR7Q8N806 425 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 SLC4A11Q8NBS3 891 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 FAM3CQ92520 227 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 FBXO32Q969P5 355 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 SRRTQ9BXP5 876 aaKnown RBP20.11■□□□□ 0.81
UBXN1-211ENST00000531056 C8orf33Q9H7E9 229 aaPredicted RBP20.11■□□□□ 0.81
UBXN1-211ENST00000531056 HPS4Q9NQG7 708 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 ARHGAP26Q9UNA1 814 aa20.11■□□□□ 0.81
UBXN1-211ENST00000531056 HDCP19113 662 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 MAGEA9P43362 315 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 RPS9P46781 194 aaKnown RBP20.1■□□□□ 0.81
UBXN1-211ENST00000531056 ZXDBP98169 803 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 MTF1Q14872 753 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 ANGPT1Q15389 498 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 PPP1R26Q5T8A7 1209 aaPredicted RBP20.1■□□□□ 0.81
UBXN1-211ENST00000531056 SNX30Q5VWJ9 437 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 PDZD8Q8NEN9 1154 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 LMO3Q8TAP4 145 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 TMEM176AQ96HP8 235 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 PHOX2BQ99453 314 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 GKN1Q9NS71 199 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 FAM86C1Q9NVL1 165 aa20.1■□□□□ 0.81
UBXN1-211ENST00000531056 NDRG2Q9UN36 371 aaKnown RBP20.1■□□□□ 0.81
UBXN1-211ENST00000531056 SPECC1L-ADORA2AF8WAN1 911 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 P4HA2O15460 535 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 ZDHHC11BP0C7U3 371 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 CTHP32929 405 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 KPNA1P52294 538 aaPredicted RBP20.09■□□□□ 0.81
UBXN1-211ENST00000531056 SLC7A9P82251 487 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 TRIM68Q6AZZ1 485 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 C1orf228Q6PIY5 440 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 GPRIN1Q7Z2K8 1008 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 RALGPS2Q86X27 583 aaPredicted RBP20.09■□□□□ 0.81
UBXN1-211ENST00000531056 MLKLQ8NB16 471 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 TTC8Q8TAM2 541 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 SH3RF2Q8TEC5 729 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 DNAI2Q9GZS0 605 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 RNF38Q9H0F5 515 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 NUP62CLQ9H1M0 184 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 PNPLA8Q9NP80 782 aa20.09■□□□□ 0.81
UBXN1-211ENST00000531056 OTOL1A6NHN0 477 aaPredicted RBP20.08■□□□□ 0.81
UBXN1-211ENST00000531056 NCAM2O15394 837 aa20.08■□□□□ 0.81
UBXN1-211ENST00000531056 FGFR1OPO95684 399 aaKnown RBP20.08■□□□□ 0.81
UBXN1-211ENST00000531056 TBXAS1P24557 533 aaPredicted RBP20.08■□□□□ 0.81
UBXN1-211ENST00000531056 KCNH2Q12809 1159 aa20.08■□□□□ 0.81
UBXN1-211ENST00000531056 LRMPQ12912 555 aa20.08■□□□□ 0.81
UBXN1-211ENST00000531056 ITPRIPL2Q3MIP1 535 aa20.08■□□□□ 0.81
UBXN1-211ENST00000531056 TXNDC11Q6PKC3 985 aa20.08■□□□□ 0.81
UBXN1-211ENST00000531056 C1orf210Q8IVY1 113 aa20.08■□□□□ 0.81
UBXN1-211ENST00000531056 OSCP1Q8WVF1 389 aa20.08■□□□□ 0.81
UBXN1-211ENST00000531056 ATOH1Q92858 354 aaPredicted RBP20.08■□□□□ 0.81
UBXN1-211ENST00000531056 CHFRQ96EP1 664 aa20.08■□□□□ 0.81
UBXN1-211ENST00000531056 HEXIM2Q96MH2 286 aaKnown RBP20.08■□□□□ 0.81
UBXN1-211ENST00000531056 DUSP16Q9BY84 665 aa20.08■□□□□ 0.81
UBXN1-211ENST00000531056 EBF3Q9H4W6 596 aa20.08■□□□□ 0.81
UBXN1-211ENST00000531056 GMIPQ9P107 970 aa20.08■□□□□ 0.81
UBXN1-211ENST00000531056 F5P12259 2224 aa20.08■□□□□ 0.8
UBXN1-211ENST00000531056 CACNA1HO95180 2353 aa20.08■□□□□ 0.8
UBXN1-211ENST00000531056 ABL1P00519 1130 aa20.07■□□□□ 0.8
UBXN1-211ENST00000531056 CCDC192P0DO97 292 aa20.07■□□□□ 0.8
UBXN1-211ENST00000531056 ARSAP15289 507 aa20.07■□□□□ 0.8
UBXN1-211ENST00000531056 TUBP50607 506 aa20.07■□□□□ 0.8
UBXN1-211ENST00000531056 YWHAEP62258 255 aaKnown RBP20.07■□□□□ 0.8
UBXN1-211ENST00000531056 RUNX3Q13761 415 aa20.07■□□□□ 0.8
UBXN1-211ENST00000531056 PDGFRLQ15198 375 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms