RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 TNFRSF10BO14763 440 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TRIM66O15016 1216 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ARHGAP6O43182 974 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 RTN2O75298 545 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 FTLP02792 175 aaPredicted RBP12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MMP8P22894 467 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 NSFP46459 744 aaKnown RBP12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 RPL10AP62906 217 aaKnown RBP12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 HYAL1Q12794 435 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PTP4A2Q12974 167 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 KCNC3Q14003 757 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 LLGL2Q6P1M3 1020 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TOGARAM2Q6ZUX3 1019 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PHF13Q86YI8 300 aaPredicted RBP12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 VN1R2Q8NFZ6 395 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 SLC7A14Q8TBB6 771 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 GIPC2Q8TF65 315 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 KCTD13Q8WZ19 329 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PPP1R13BQ96KQ4 1090 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 EIF3CQ99613 913 aaKnown RBP12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MAN1C1Q9NR34 630 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ST7Q9NRC1 585 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 REXO2Q9Y3B8 237 aaKnown RBP12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MYH10P35580 1976 aa12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 E5RJQ4 531 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ERBB2P04626 1255 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 C8AP07357 584 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TWF1Q12792 350 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 RAB41Q5JT25 222 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MMS22LQ6ZRQ5 1243 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MON1BQ7L1V2 547 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TMEM110Q86TL2 294 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ERICH1Q86X53 443 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MCOLN2Q8IZK6 566 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ACRBPQ8NEB7 543 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 SCAMP5Q8TAC9 235 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 SPATA17Q96L03 361 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 HSFY1Q96LI6 401 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 NOX5Q96PH1 765 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 C11orf70Q9BRQ4 267 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 DESI2Q9BSY9 194 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PACSIN1Q9BY11 444 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PLEKHA4Q9H4M7 779 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 IGFLR1Q9H665 355 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PNPLA8Q9NP80 782 aa12.81□□□□□ -0.36
TRAF3IP2-211ENST00000528599 LCP1P13796 627 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ALDH1A3P47895 512 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 SLC5A3P53794 718 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 USP46P62068 366 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ADIGQ0VDE8 80 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MTMR3Q13615 1198 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CYP4A22Q5TCH4 519 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 LIN9Q5TKA1 542 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CCDC149Q6ZUS6 474 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PPP2R3CQ969Q6 453 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CDCA3Q99618 268 aaPredicted RBP12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CYLDQ9NQC7 956 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ADAM22Q9P0K1 906 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PATJQ8NI35 1801 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MTCL1Q9Y4B5 1905 aaKnown RBP12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 SLC38A8A6NNN8 435 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 LINC01565O15544 149 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PAPSS1O43252 624 aaPredicted RBP12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 NRDCO43847 1150 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 RFPL2O75678 378 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ZMYND10O75800 440 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MAGEA1P43355 309 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 GABRB2P47870 512 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TKTL1P51854 596 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 GALCP54803 685 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 SPA17Q15506 151 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 DENND5BQ6ZUT9 1274 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PHLDB2Q86SQ0 1253 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 SCUBE3Q8IX30 993 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 NUP93Q8N1F7 819 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 FEZF2Q8TBJ5 459 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CLEC4CQ8WTT0 213 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 HDAC7Q8WUI4 952 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 NDRG1Q92597 394 aaKnown RBP12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 C18orf8Q96DM3 657 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MIS12Q9H081 205 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 SYNCQ9H7C4 482 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 LRRC4Q9HBW1 653 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 KCND1Q9NSA2 647 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TFR2Q9UP52 801 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PCDHA13Q9Y5I0 950 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ADGRG1Q9Y653 693 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 USP3Q9Y6I4 520 aa12.8□□□□□ -0.36
TRAF3IP2-211ENST00000528599 RCCD1A6NED2 376 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 GLP2RO95838 553 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 H2AFZP0C0S5 128 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 HMGA1P17096 107 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ABCB4P21439 1286 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ACADSBP45954 432 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 EPHB3P54753 998 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 DLX2Q07687 328 aaPredicted RBP12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 IFRD2Q12894 506 aaPredicted RBP12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 COL19A1Q14993 1142 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PPM1LQ5SGD2 360 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms