RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CCDC40Q4G0X9 1142 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 SNX30Q5VWJ9 437 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 CC2D1AQ6P1N0 951 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 RALGPS2Q86X27 583 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 KIAA1958Q8N8K9 716 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 ARL14EPQ8N8R7 260 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 C12orf29Q8N999 325 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 ZMIZ2Q8NF64 920 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 SLC2A14Q8TDB8 520 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 ATOH1Q92858 354 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 TATDN2Q93075 761 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 TWNKQ96RR1 684 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 SLC22A12Q96S37 553 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 CYP2S1Q96SQ9 504 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 SMOQ99835 787 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 TRPC7Q9HCX4 862 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 PNPLA8Q9NP80 782 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.84□□□□□ -0.351e-22■■■■■ 419.2
TRAPPC4-209ENST00000528230 GKN1Q9NS71 199 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 ARHGAP26Q9UNA1 814 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 CTNND2Q9UQB3 1225 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 CCL26Q9Y258 94 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 CACNA1IQ9P0X4 2223 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 C2orf78A6NCI8 922 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 OLFM2O95897 454 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 FAM200BP0CF97 657 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 CCDC130P13994 396 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 CD58P19256 250 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 KPNA1P52294 538 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 YWHAEP62258 255 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 SLC7A9P82251 487 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 CETN1Q12798 172 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 ORC1Q13415 861 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 PDGFRLQ15198 375 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 ZNF77Q15935 545 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 CAMK4Q16566 473 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 ITPRIPL2Q3MIP1 535 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 MAMSTRQ6ZN01 415 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 C1orf210Q8IVY1 113 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 MLKLQ8NB16 471 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 FBXO32Q969P5 355 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 ZFYVE19Q96K21 471 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 IER2Q9BTL4 223 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 SRRTQ9BXP5 876 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 FBXO44Q9H4M3 255 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 KRT82Q9NSB4 513 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 CISHQ9NSE2 258 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 FAM49BQ9NUQ9 324 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 GTSE1Q9NYZ3 720 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 RWDD2AQ9UIY3 292 aa12.83□□□□□ -0.36
TRAPPC4-209ENST00000528230 PROB1E7EW31 1015 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 SPECC1L-ADORA2AF8WAN1 911 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 BEST1O76090 585 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 OAS1P00973 400 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 ZDHHC11BP0C7U3 371 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 TBXAS1P24557 533 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 CTHP32929 405 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 NBL1P41271 181 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 TUBP50607 506 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 SLC5A3P53794 718 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 STX17P56962 302 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 MAP3K7CLP57077 242 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 AMPD2Q01433 879 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 USP4Q13107 963 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 CUL2Q13617 745 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 RUNX3Q13761 415 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 MTF1Q14872 753 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 CLEC20AQ6ZU45 233 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 TRIM59Q8IWR1 403 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 SCAMP5Q8TAC9 235 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 OSCP1Q8WVF1 389 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 HEXIM2Q96MH2 286 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 UBXN6Q9BZV1 441 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 RNF38Q9H0F5 515 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 CLSTN2Q9H4D0 955 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 FANCMQ8IYD8 2048 aa12.82□□□□□ -0.36
TRAPPC4-209ENST00000528230 HHLA1C9JL84 531 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 ABL1P00519 1130 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 CCDC192P0DO97 292 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 CHRNB1P11230 501 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 ADORA2BP29275 332 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 RAD23BP54727 409 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 TNK2Q07912 1038 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 IFRD2Q12894 506 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 ZNF394Q53GI3 561 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 DGKKQ5KSL6 1271 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 HECTD3Q5T447 861 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 PPP1R26Q5T8A7 1209 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 ARHGAP17Q68EM7 881 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 DDX42Q86XP3 938 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 SLC4A11Q8NBS3 891 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 RIN3Q8TB24 985 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 SH3RF2Q8TEC5 729 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 DUSP16Q9BY84 665 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 CHRDQ9H2X0 955 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 LMAN1LQ9HAT1 526 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 HPS4Q9NQG7 708 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 LMBRD1Q9NUN5 540 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms