RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 CYP17A1P05093 508 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 ATICP31939 592 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 SEC13P55735 322 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 MYL6P60660 151 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 IFRD2Q12894 506 aaPredicted RBP18.32■□□□□ 0.52
ATM-213ENST00000527891 BMT2Q1RMZ1 405 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 GAB4Q2WGN9 574 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 C2orf27AQ580R0 203 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 C12orf56Q8IXR9 622 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 ADGRG2Q8IZP9 1017 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 ZNF516Q92618 1163 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 SYAP1Q96A49 352 aaPredicted RBP18.32■□□□□ 0.52
ATM-213ENST00000527891 GZF1Q9H116 711 aaPredicted RBP18.32■□□□□ 0.52
ATM-213ENST00000527891 XYLT2Q9H1B5 865 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 BLZF1Q9H2G9 400 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 TMEM30AQ9NV96 361 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 SMPD4Q9NXE4 827 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 NXF1Q9UBU9 619 aaKnown RBP18.32■□□□□ 0.52
ATM-213ENST00000527891 ATG2BQ96BY7 2078 aa18.32■□□□□ 0.52
ATM-213ENST00000527891 KIAA1549LQ6ZVL6 1849 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 CLDN5O00501 218 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 CASP1P29466 404 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 GBP1P32455 592 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 CREB5Q02930 508 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 DHCR24Q15392 516 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 C11orf74Q86VG3 221 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 DDX42Q86XP3 938 aaKnown RBP eCLIP18.31■□□□□ 0.52
ATM-213ENST00000527891 NUP93Q8N1F7 819 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 B3GNT5Q9BYG0 378 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 TPSD1Q9BZJ3 242 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 SLC39A2Q9NP94 309 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 CFAP97Q9P2B7 532 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 MMP17Q9ULZ9 603 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 MYO16Q9Y6X6 1858 aa18.31■□□□□ 0.52
ATM-213ENST00000527891 SPAG17Q6Q759 2223 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 PVALEFA0A1B0GWK0 134 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 EXOC3O60645 756 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 PHACTR2O75167 634 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 RTN3O95197 1032 aaPredicted RBP18.3■□□□□ 0.52
ATM-213ENST00000527891 CAVIN2O95810 425 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 MBL2P11226 248 aaPredicted RBP18.3■□□□□ 0.52
ATM-213ENST00000527891 YWHAQP27348 245 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 EIF2DP41214 584 aaKnown RBP18.3■□□□□ 0.52
ATM-213ENST00000527891 MRPS21P82921 87 aaKnown RBP18.3■□□□□ 0.52
ATM-213ENST00000527891 KNOP1Q1ED39 458 aaKnown RBP18.3■□□□□ 0.52
ATM-213ENST00000527891 USP39Q53GS9 565 aaKnown RBP18.3■□□□□ 0.52
ATM-213ENST00000527891 FOXD4L5Q5VV16 416 aaPredicted RBP18.3■□□□□ 0.52
ATM-213ENST00000527891 RNF43Q68DV7 783 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 TCEAL6Q6IPX3 200 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 ANO7Q6IWH7 933 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 RASSF3Q86WH2 238 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 PDZD8Q8NEN9 1154 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 FOXD4L4Q8WXT5 416 aaPredicted RBP18.3■□□□□ 0.52
ATM-213ENST00000527891 OVCA2Q8WZ82 227 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 TCEAL3Q969E4 200 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 CNOT6LQ96LI5 555 aaKnown RBP18.3■□□□□ 0.52
ATM-213ENST00000527891 VRTNQ9H8Y1 702 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 FAM13BQ9NYF5 915 aa18.3■□□□□ 0.52
ATM-213ENST00000527891 ATP8B3O60423 1300 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 BCLAF3A2AJT9 711 aaKnown RBP18.29■□□□□ 0.52
ATM-213ENST00000527891 SCAMP3O14828 347 aaKnown RBP18.29■□□□□ 0.52
ATM-213ENST00000527891 CLSTN1O94985 981 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 ADH1CP00326 375 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 CASP4P49662 377 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 BIRC3Q13489 604 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 CUL4BQ13620 913 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 CRY1Q16526 586 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 ZNF699Q32M78 642 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 PMS2CLQ68D20 193 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 CCDC33Q8N5R6 958 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 GOLGA5Q8TBA6 731 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 FBXO32Q969P5 355 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 PNKPQ96T60 521 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 EDEM2Q9BV94 578 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 BACH2Q9BYV9 841 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 SMYD3Q9H7B4 428 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 INVSQ9Y283 1065 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 LAMA1P25391 3075 aa18.29■□□□□ 0.52
ATM-213ENST00000527891 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.28■□□□□ 0.52
ATM-213ENST00000527891 ANTXRLA6NF34 631 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 APODP05090 189 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 AFMP43652 599 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 SLC6A11P48066 632 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 ME1P48163 572 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 AP3M2P53677 418 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 FOXD4L6Q3SYB3 417 aaPredicted RBP18.28■□□□□ 0.52
ATM-213ENST00000527891 ZNF667Q5HYK9 610 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 N4BP2L1Q5TBK1 243 aaPredicted RBP18.28■□□□□ 0.52
ATM-213ENST00000527891 RHBDF2Q6PJF5 856 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 FOXD4L3Q6VB84 417 aaPredicted RBP18.28■□□□□ 0.52
ATM-213ENST00000527891 FAM35AQ86V20 835 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 MDGA1Q8NFP4 955 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 PLEKHO2Q8TD55 490 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 TNIP3Q96KP6 325 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 KCNK16Q96T55 309 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 LSM14BQ9BX40 385 aaKnown RBP18.28■□□□□ 0.52
ATM-213ENST00000527891 TBC1D14Q9P2M4 693 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 ANGPTL2Q9UKU9 493 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 PCDHA7Q9UN72 937 aa18.28■□□□□ 0.52
ATM-213ENST00000527891 SDK1Q7Z5N4 2213 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms