RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 EOMESO95936 686 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 CD3EP07766 207 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 TXNP10599 105 aaKnown RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 TGFB3P10600 412 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 IFNGR1P15260 489 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 CYP2B6P20813 491 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 LPOP22079 712 aaPredicted RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 MARK3P27448 753 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 CTGFP29279 349 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 CYP2C19P33261 490 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 TCF7P36402 384 aaPredicted RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 MTIF2P46199 727 aaKnown RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 TM4SF4P48230 202 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 KPNA1P52294 538 aaPredicted RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 ZNF131P52739 623 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 SESN3P58005 492 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 ARHGAP1Q07960 439 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 SREBF2Q12772 1141 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 LRMPQ12912 555 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 KCNAB2Q13303 367 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 GBX1Q14549 363 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 ODF1Q14990 250 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 EMC2Q15006 297 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 CCL14Q16627 93 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 HSDL1Q3SXM5 330 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 ZCWPW2Q504Y3 356 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 TCP11X2Q5H9J9 407 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 PRAMEF19Q5SWL8 479 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 CELF3Q5SZQ8 465 aaKnown RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 C10orf62Q5T681 223 aaPredicted RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 FAM160B1Q5W0V3 765 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 TAPT1Q6NXT6 567 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 CRTC3Q6UUV7 619 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 C17orf99Q6UX52 265 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 METTL7BQ6UX53 244 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 MAMDC4Q6UXC1 1216 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 SEZ6L2Q6UXD5 910 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 LRRC55Q6ZSA7 311 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 VSTM4Q8IW00 320 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 CMTR2Q8IYT2 770 aaKnown RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 ABRAQ8N0Z2 381 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 ANKRD20A12PQ8NF67 263 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 PJA1Q8NG27 643 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 SCFD2Q8WU76 684 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 TP53INP1Q96A56 240 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 CEP170P1Q96L14 293 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 SPATA33Q96N06 139 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 FCRL3Q96P31 734 aaPredicted RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 FIZ1Q96SL8 496 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 GPR20Q99678 358 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 TSG101Q99816 390 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 KIFC3Q9BVG8 833 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 GTPBP4Q9BZE4 634 aaKnown RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 ARHGAP39Q9C0H5 1083 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 KATNBL1Q9H079 304 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 KCTD10Q9H3F6 313 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 THAP9Q9H5L6 903 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 ZCCHC17Q9NP64 241 aaKnown RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 ANLNQ9NQW6 1124 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 XPNPEP1Q9NQW7 623 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 ANKEF1Q9NU02 776 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 C14orf119Q9NWQ9 140 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 OXSMQ9NWU1 459 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 FLRT1Q9NZU1 646 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 H2AFY2Q9P0M6 372 aaPredicted RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 LIMA1Q9UHB6 759 aaKnown RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 ZHX1Q9UKY1 873 aaPredicted RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 ODF2LQ9ULJ1 636 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 GBF1Q92538 1859 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 DOCK6Q96HP0 2047 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 BDP1A6H8Y1 2624 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 GREB1Q4ZG55 1949 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 UBE4BO95155 1302 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 ADGRA3Q8IWK6 1321 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 IGKV6D-21A0A0A0MT36 114 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 SHISA3A0PJX4 238 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 CCDC66A2RUB6 948 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 CCDC169A6NNP5 214 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 LGALS16A8MUM7 142 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 TISP43B9A030 160 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 TNPO2O14787 897 aaKnown RBP4.5□□□□□ -1.69
CD44-226ENST00000527889 N4BP3O15049 544 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 EIF3DO15371 548 aaKnown RBP eCLIP4.5□□□□□ -1.69
CD44-226ENST00000527889 SLC16A4O15374 487 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 TGM5O43548 720 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 DYRK3O43781 588 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 PCDHGA12O60330 932 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 DKC1O60832 514 aaKnown RBP eCLIP4.5□□□□□ -1.69
CD44-226ENST00000527889 TBC1D8O95759 1140 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 GH1P01241 217 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 LTFP02788 710 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 SOD2P04179 222 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 TPM3P06753 285 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 NFICP08651 508 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 ZNF286BP0CG31 522 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 PLS3P13797 630 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 GLB1P16278 677 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 EEF1GP26641 437 aaKnown RBP4.5□□□□□ -1.69
CD44-226ENST00000527889 PEX19P40855 299 aa4.5□□□□□ -1.69
CD44-226ENST00000527889 PPP1R2P41236 205 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms