RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 EIF5BO60841 1220 aaKnown RBP13.16□□□□□ -0.3
SRPRA-202ENST00000527817 ITGB3P05106 788 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 KRT18P05783 430 aaKnown RBP13.16□□□□□ -0.3
SRPRA-202ENST00000527817 SYPP08247 313 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 UBA7P41226 1012 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
SRPRA-202ENST00000527817 SCAPQ12770 1279 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 MCM6Q14566 821 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 DENND5BQ6ZUT9 1274 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 LIMS2Q7Z4I7 341 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 PGBD3Q8N328 593 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 TTLL2Q9BWV7 592 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 GTPBP2Q9BX10 602 aaKnown RBP13.16□□□□□ -0.3
SRPRA-202ENST00000527817 ZHX3Q9H4I2 956 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 EHD2Q9NZN4 543 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 URB1O60287 2271 aaKnown RBP13.16□□□□□ -0.3
SRPRA-202ENST00000527817 APC2O95996 2303 aa13.16□□□□□ -0.3
SRPRA-202ENST00000527817 CEP192Q8TEP8 1941 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 TCRBV21S2A2A0A5A6 115 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 ZNF840PA6NDX5 716 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.15□□□□□ -0.3
SRPRA-202ENST00000527817 TBCAO75347 108 aaKnown RBP13.15□□□□□ -0.3
SRPRA-202ENST00000527817 OLFM2O95897 454 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 ADH1CP00326 375 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.3
SRPRA-202ENST00000527817 PLCG1P19174 1290 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 WNT7BP56706 349 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 RBP5P82980 135 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 RPL6Q02878 288 aaKnown RBP13.15□□□□□ -0.3
SRPRA-202ENST00000527817 ZNF33AQ06730 810 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 RESTQ13127 1097 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 TRIP6Q15654 476 aaKnown RBP13.15□□□□□ -0.3
SRPRA-202ENST00000527817 CCDC142Q17RM4 750 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 SOWAHAQ2M3V2 549 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 SCARA3Q6AZY7 606 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 C19orf48Q6RUI8 117 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 CCNI2Q6ZMN8 369 aaPredicted RBP13.15□□□□□ -0.3
SRPRA-202ENST00000527817 PDZD3Q86UT5 571 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 MINDY1Q8N5J2 469 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 ADAMTS14Q8WXS8 1223 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 RAD54LQ92698 747 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 HVCN1Q96D96 273 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 STRA6Q9BX79 667 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 FSCN3Q9NQT6 498 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 TBC1D14Q9P2M4 693 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 ITGA11Q9UKX5 1188 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 SNX9Q9Y5X1 595 aa13.15□□□□□ -0.3
SRPRA-202ENST00000527817 ATXN2Q99700 1313 aaKnown RBP13.14□□□□□ -0.31
SRPRA-202ENST00000527817 HELZ2Q9BYK8 2649 aaKnown RBP13.14□□□□□ -0.31
SRPRA-202ENST00000527817 HELZP42694 1942 aaKnown RBP13.14□□□□□ -0.31
SRPRA-202ENST00000527817 A0A1W2PQD8 194 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 ATP2C2O75185 946 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 GJB3O75712 270 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 BDNFP23560 247 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 LMO2P25791 158 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 DDIT3P35638 169 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 GRIK1P39086 918 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 USP46P62068 366 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 NOP14P78316 857 aaKnown RBP13.14□□□□□ -0.31
SRPRA-202ENST00000527817 MAPRE1Q15691 268 aaKnown RBP13.14□□□□□ -0.31
SRPRA-202ENST00000527817 PREPLQ4J6C6 727 aaPredicted RBP13.14□□□□□ -0.31
SRPRA-202ENST00000527817 TRMT11Q7Z4G4 463 aaKnown RBP13.14□□□□□ -0.31
SRPRA-202ENST00000527817 C12orf40Q86WS4 652 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 DDX42Q86XP3 938 aaKnown RBP eCLIP13.14□□□□□ -0.31
SRPRA-202ENST00000527817 BRSK2Q8IWQ3 736 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 ADGRF2Q8IZF7 708 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 PHTF2Q8N3S3 785 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 OTUB2Q96DC9 234 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 IKZF4Q9H2S9 585 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 CDH9Q9ULB4 789 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 PCDHB9Q9Y5E1 797 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 CPQQ9Y646 472 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 CELSR3Q9NYQ7 3312 aa13.14□□□□□ -0.31
SRPRA-202ENST00000527817 PCDH15Q96QU1 1955 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 E2F8A0AVK6 867 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 TBC1D3BA6NDS4 549 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 HCRTO43612 131 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 SH3BP5O60239 455 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 ZNF217O75362 1048 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 PPP1R37O75864 691 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 OAS1P00973 400 aaKnown RBP13.13□□□□□ -0.31
SRPRA-202ENST00000527817 ADH5P11766 374 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 GABRG2P18507 467 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 GAD2Q05329 585 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 MYO1EQ12965 1108 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 COL28A1Q2UY09 1125 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 MCTP1Q6DN14 999 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 DEFB119Q8N690 84 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 KRI1Q8N9T8 703 aaKnown RBP13.13□□□□□ -0.31
SRPRA-202ENST00000527817 ZSWIM2Q8NEG5 633 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 LARP4BQ92615 738 aaKnown RBP13.13□□□□□ -0.31
SRPRA-202ENST00000527817 C8orf48Q96LL4 319 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 SYT15Q9BQS2 421 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 CCDC86Q9H6F5 360 aaKnown RBP13.13□□□□□ -0.31
SRPRA-202ENST00000527817 ZDHHC4Q9NPG8 344 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 CRTAC1Q9NQ79 661 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 CFAP97Q9P2B7 532 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms