RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 CISHQ9NSE2 258 aa27.94■■■□□ 2.06
TSPAN4-217ENST00000527644 IL37Q9NZH6 218 aa27.94■■■□□ 2.06
TSPAN4-217ENST00000527644 ANAPC1Q9H1A4 1944 aa27.94■■■□□ 2.06
TSPAN4-217ENST00000527644 FGFR1OPO95684 399 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 FAM200BP0CF97 657 aa27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 MAGEA9P43362 315 aa27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 KPNA1P52294 538 aaPredicted RBP27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 SLC5A3P53794 718 aa27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 IFRD2Q12894 506 aaPredicted RBP27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 CC2D1AQ6P1N0 951 aaPredicted RBP27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 PDZD8Q8NEN9 1154 aa27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 ZMIZ2Q8NF64 920 aa27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 ATOH1Q92858 354 aaPredicted RBP27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 FAM83CQ9BQN1 747 aa27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 SRRTQ9BXP5 876 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 GKN1Q9NS71 199 aa27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 RWDD2AQ9UIY3 292 aa27.93■■■□□ 2.06
TSPAN4-217ENST00000527644 BEST1O76090 585 aa27.92■■■□□ 2.06
TSPAN4-217ENST00000527644 ADORA2BP29275 332 aa27.92■■■□□ 2.06
TSPAN4-217ENST00000527644 MARSP56192 900 aaKnown RBP27.92■■■□□ 2.06
TSPAN4-217ENST00000527644 MAP3K7CLP57077 242 aa27.92■■■□□ 2.06
TSPAN4-217ENST00000527644 CETN1Q12798 172 aa27.92■■■□□ 2.06
TSPAN4-217ENST00000527644 SCAMP5Q8TAC9 235 aa27.92■■■□□ 2.06
TSPAN4-217ENST00000527644 FBXO32Q969P5 355 aa27.92■■■□□ 2.06
TSPAN4-217ENST00000527644 CLDN23Q96B33 292 aa27.92■■■□□ 2.06
TSPAN4-217ENST00000527644 GTSE1Q9NYZ3 720 aa27.92■■■□□ 2.06
TSPAN4-217ENST00000527644 ARHGAP26Q9UNA1 814 aa27.92■■■□□ 2.06
TSPAN4-217ENST00000527644 MIA3Q5JRA6 1907 aa27.92■■■□□ 2.06
TSPAN4-217ENST00000527644 P4HA2O15460 535 aa27.91■■■□□ 2.06
TSPAN4-217ENST00000527644 TCF3P15923 654 aa27.91■■■□□ 2.06
TSPAN4-217ENST00000527644 CUL2Q13617 745 aa27.91■■■□□ 2.06
TSPAN4-217ENST00000527644 ANGPT1Q15389 498 aa27.91■■■□□ 2.06
TSPAN4-217ENST00000527644 ZNF394Q53GI3 561 aa27.91■■■□□ 2.06
TSPAN4-217ENST00000527644 MLKLQ8NB16 471 aa27.91■■■□□ 2.06
TSPAN4-217ENST00000527644 TMEM176AQ96HP8 235 aa27.91■■■□□ 2.06
TSPAN4-217ENST00000527644 HEXIM2Q96MH2 286 aaKnown RBP27.91■■■□□ 2.06
TSPAN4-217ENST00000527644 ARID3AQ99856 593 aa27.91■■■□□ 2.06
TSPAN4-217ENST00000527644 LMBRD1Q9NUN5 540 aa27.91■■■□□ 2.06
TSPAN4-217ENST00000527644 FAM92AA1XBS5 289 aa27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 ABL1P00519 1130 aa27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 RPS9P46781 194 aaKnown RBP27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 TNK2Q07912 1038 aa27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 MTF1Q14872 753 aa27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 ZNF77Q15935 545 aa27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 ITPRIPL2Q3MIP1 535 aa27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 RALGPS2Q86X27 583 aaPredicted RBP27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 TRIM59Q8IWR1 403 aa27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 ZNF687Q8N1G0 1237 aa27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 RIN3Q8TB24 985 aa27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 FBXO44Q9H4M3 255 aa27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 NDRG2Q9UN36 371 aaKnown RBP27.9■■■□□ 2.06
TSPAN4-217ENST00000527644 SPECC1L-ADORA2AF8WAN1 911 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 OAS1P00973 400 aaKnown RBP27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 CCDC192P0DO97 292 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 TBXAS1P24557 533 aaPredicted RBP27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 RAD23BP54727 409 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 YWHAEP62258 255 aaKnown RBP27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 SLC7A9P82251 487 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 USP4Q13107 963 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 FZD5Q13467 585 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 PDGFRLQ15198 375 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 SNX30Q5VWJ9 437 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 CLEC20AQ6ZU45 233 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 C1orf210Q8IVY1 113 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 SLC4A11Q8NBS3 891 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 TTC8Q8TAM2 541 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 SH3RF2Q8TEC5 729 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 IPO9Q96P70 1041 aaKnown RBP27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 GBP4Q96PP9 640 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 NUP62CLQ9H1M0 184 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 PNPLA8Q9NP80 782 aa27.89■■■□□ 2.06
TSPAN4-217ENST00000527644 KIF26AQ9ULI4 1882 aaPredicted RBP27.89■■■□□ 2.05
TSPAN4-217ENST00000527644 OLFM2O95897 454 aa27.88■■■□□ 2.05
TSPAN4-217ENST00000527644 CTHP32929 405 aa27.88■■■□□ 2.05
TSPAN4-217ENST00000527644 SOX9P48436 509 aa27.88■■■□□ 2.05
TSPAN4-217ENST00000527644 RUNX3Q13761 415 aa27.88■■■□□ 2.05
TSPAN4-217ENST00000527644 PPP1R26Q5T8A7 1209 aaPredicted RBP27.88■■■□□ 2.05
TSPAN4-217ENST00000527644 RNF38Q9H0F5 515 aa27.88■■■□□ 2.05
TSPAN4-217ENST00000527644 HPS4Q9NQG7 708 aa27.88■■■□□ 2.05
TSPAN4-217ENST00000527644 CHORDC1Q9UHD1 332 aaPredicted RBP27.88■■■□□ 2.05
TSPAN4-217ENST00000527644 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.88■■■□□ 2.05
TSPAN4-217ENST00000527644 MYH10P35580 1976 aa27.88■■■□□ 2.05
TSPAN4-217ENST00000527644 KCNH2Q12809 1159 aa27.87■■■□□ 2.05
TSPAN4-217ENST00000527644 LRMPQ12912 555 aa27.87■■■□□ 2.05
TSPAN4-217ENST00000527644 TRIM68Q6AZZ1 485 aa27.87■■■□□ 2.05
TSPAN4-217ENST00000527644 OSCP1Q8WVF1 389 aa27.87■■■□□ 2.05
TSPAN4-217ENST00000527644 NT5C1BQ96P26 610 aa27.87■■■□□ 2.05
TSPAN4-217ENST00000527644 DUSP16Q9BY84 665 aa27.87■■■□□ 2.05
TSPAN4-217ENST00000527644 EBF3Q9H4W6 596 aa27.87■■■□□ 2.05
TSPAN4-217ENST00000527644 PIEZO1Q92508 2521 aa27.87■■■□□ 2.05
TSPAN4-217ENST00000527644 HHLA1C9JL84 531 aa27.86■■■□□ 2.05
TSPAN4-217ENST00000527644 ZDHHC11BP0C7U3 371 aa27.86■■■□□ 2.05
TSPAN4-217ENST00000527644 HECTD3Q5T447 861 aa27.86■■■□□ 2.05
TSPAN4-217ENST00000527644 ARHGAP17Q68EM7 881 aa27.86■■■□□ 2.05
TSPAN4-217ENST00000527644 KIAA1958Q8N8K9 716 aa27.86■■■□□ 2.05
TSPAN4-217ENST00000527644 TTC16Q8NEE8 873 aa27.86■■■□□ 2.05
TSPAN4-217ENST00000527644 LMAN1LQ9HAT1 526 aa27.86■■■□□ 2.05
TSPAN4-217ENST00000527644 FAM86C1Q9NVL1 165 aa27.86■■■□□ 2.05
TSPAN4-217ENST00000527644 SPATA6Q9NWH7 488 aaPredicted RBP27.86■■■□□ 2.05
TSPAN4-217ENST00000527644 DUS2Q9NX74 493 aaKnown RBP27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms