RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 MYL2P10916 166 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 RPL22P35268 128 aaKnown RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 YWHAGP61981 247 aaKnown RBP eCLIP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 CDK16Q00536 496 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 ZNF252P-AS1Q0IIN9 211 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 PTK7Q13308 1070 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 THOC5Q13769 683 aaKnown RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 NCOA4Q13772 614 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 LBRQ14739 615 aaKnown RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 RASA2Q15283 850 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 RBBP5Q15291 538 aaKnown RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 LY6KQ17RY6 165 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 LRRC38Q5VT99 294 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 RNF220Q5VTB9 566 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 PPP1R2P3Q6NXS1 205 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 TTC7BQ86TV6 843 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 TMEM35BQ8NCS4 154 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 WDR60Q8WVS4 1066 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 TMEM143Q96AN5 459 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 MSTO1Q9BUK6 570 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 ACAD9Q9H845 621 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 LRCH1Q9Y2L9 728 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 A0A0G2JLL6 359 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-208ENST00000527323 IQANK1A0A1B0GTG1 560 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 TCRBV7S3A2A0A539 114 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 SOCS7O14512 581 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 MAP3K7O43318 606 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 AHCYL1O43865 530 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 TBX10O75333 385 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 PSMA2P25787 234 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 POLE2P56282 527 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 PIGHQ14442 188 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-208ENST00000527323 ZBTB41Q5SVQ8 909 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 PRRT2Q7Z6L0 340 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-208ENST00000527323 TRIM50Q86XT4 487 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 FBXO16Q8IX29 292 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-208ENST00000527323 CTAGE3PQ8IX95 158 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 OR5B17Q8NGF7 314 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 PTCD3Q96EY7 689 aaKnown RBP13.06□□□□□ -0.32
CAPN1-208ENST00000527323 PPP1R16BQ96T49 567 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 CYTH2Q99418 400 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 PIDD1Q9HB75 910 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 DOCK1Q14185 1865 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 B2RBV5 119 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 K7ERI5 159 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 ABLIM1O14639 778 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 NPTXRO95502 500 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 FESP07332 822 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 PYGBP11216 843 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 FAAP100Q0VG06 881 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 CCDC142Q17RM4 750 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 CMPK2Q5EBM0 449 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 MDH1BQ5I0G3 518 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 LBX2Q6XYB7 198 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 ARHGAP24Q8N264 748 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 C2orf69Q8N8R5 385 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 FAM71DQ8N9W8 422 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 DCAKDQ8WVC6 231 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 NRG4Q8WWG1 115 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 FAM161BQ96MY7 647 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 XPNPEP1Q9NQW7 623 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 C2CD2Q9Y426 696 aa13.06□□□□□ -0.32
CAPN1-208ENST00000527323 PAPPA2Q9BXP8 1791 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 FAM237BA0A1B0GVD1 139 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 H0YCG3 227 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 FCHO1O14526 889 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 MYCP01106 439 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-208ENST00000527323 PRAMEF19Q5SWL8 479 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 FAM182AQ5T1J6 154 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 RFX6Q8HWS3 928 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 ZNF276Q8N554 614 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 DEPTORQ8TB45 409 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 SLC35B2Q8TB61 432 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 ZC3H15Q8WU90 426 aaKnown RBP13.05□□□□□ -0.32
CAPN1-208ENST00000527323 LENG1Q96BZ8 264 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-208ENST00000527323 TARS2Q9BW92 718 aaKnown RBP13.05□□□□□ -0.32
CAPN1-208ENST00000527323 PCSK1NQ9UHG2 260 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-208ENST00000527323 STAM2O75886 525 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 SCARA3Q6AZY7 606 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 UNC45BQ8IWX7 931 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 OXNAD1Q96HP4 312 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-208ENST00000527323 SERAC1Q96JX3 654 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 CYP26B1Q9NR63 512 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 CPSF2Q9P2I0 782 aaKnown RBP13.05□□□□□ -0.32
CAPN1-208ENST00000527323 SLC9A2Q9UBY0 812 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 NFASCO94856 1347 aa13.05□□□□□ -0.32
CAPN1-208ENST00000527323 MAP3K13O43283 966 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 DKC1O60832 514 aaKnown RBP eCLIP13.04□□□□□ -0.32
CAPN1-208ENST00000527323 CNMDO75829 334 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 ENO1P06733 434 aaKnown RBP13.04□□□□□ -0.32
CAPN1-208ENST00000527323 ELK3P41970 407 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 ZNF200P98182 395 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-208ENST00000527323 SGSM1Q2NKQ1 1148 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 NOL9Q5SY16 702 aaKnown RBP13.04□□□□□ -0.32
CAPN1-208ENST00000527323 NAT8LQ8N9F0 302 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 TCHPQ9BT92 498 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 ARHGAP28Q9P2N2 729 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 PPARGC1AQ9UBK2 798 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms