RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 CSH2P0DML3 217 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 CHRNB1P11230 501 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 BDNFP23560 247 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 GABRR2P28476 465 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 ERCC5P28715 1186 aaPredicted RBP12.16□□□□□ -0.46
CTTN-209ENST00000525276 CDC25CP30307 473 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 FMO5P49326 533 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 NDST1P52848 882 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 INCA1Q0VD86 236 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 CETN1Q12798 172 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 SRSF5Q13243 272 aaKnown RBP12.16□□□□□ -0.46
CTTN-209ENST00000525276 TEAD2Q15562 447 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 DDR2Q16832 855 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 TPD52L1Q16890 204 aaPredicted RBP12.16□□□□□ -0.46
CTTN-209ENST00000525276 DPCR1Q3MIW9 517 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 PPM1JQ5JR12 505 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 LAIR1Q6GTX8 287 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 VITQ6UXI7 678 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 TRIM59Q8IWR1 403 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 TTC39CQ8N584 583 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 SHKBP1Q8TBC3 707 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 NETO1Q8TDF5 533 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 SECISBP2LQ93073 1101 aaKnown RBP12.16□□□□□ -0.46
CTTN-209ENST00000525276 RSPRY1Q96DX4 576 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 CEP295NLQ96MC4 621 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 ASB16Q96NS5 453 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 GCNAQ96QF7 691 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 GPR88Q9GZN0 384 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 ELOVL4Q9GZR5 314 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 ATXN3LQ9H3M9 355 aa12.16□□□□□ -0.46
CTTN-209ENST00000525276 RALYQ9UKM9 306 aaKnown RBP12.16□□□□□ -0.46
CTTN-209ENST00000525276 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.15□□□□□ -0.46
CTTN-209ENST00000525276 SLC38A8A6NNN8 435 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 K7ESF4 209 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 TRIM66O15016 1216 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 NCAM2O15394 837 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 P4HA2O15460 535 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 LRP3O75074 770 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 NOL4O94818 638 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 HMGA1P17096 107 aaKnown RBP12.15□□□□□ -0.46
CTTN-209ENST00000525276 GJA1P17302 382 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 CD58P19256 250 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 ANXA13P27216 316 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 GRIK1P39086 918 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 ARHGAP15Q53QZ3 475 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 CT47A1Q5JQC4 288 aaPredicted RBP12.15□□□□□ -0.46
CTTN-209ENST00000525276 SDHAF4Q5VUM1 108 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 RBM43Q6ZSC3 357 aaKnown RBP12.15□□□□□ -0.46
CTTN-209ENST00000525276 GAREM2Q75VX8 874 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 ACOT1Q86TX2 421 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 CELF5Q8N6W0 485 aaKnown RBP12.15□□□□□ -0.46
CTTN-209ENST00000525276 SPATA17Q96L03 361 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 CNOT6LQ96LI5 555 aaKnown RBP12.15□□□□□ -0.46
CTTN-209ENST00000525276 MED15Q96RN5 788 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 MED10Q9BTT4 135 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 NT5C1AQ9BXI3 368 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 B3GNT5Q9BYG0 378 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 ZNF518BQ9C0D4 1074 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 SLITRK6Q9H5Y7 841 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 LMAN1LQ9HAT1 526 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 IL21Q9HBE4 155 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 TRPV5Q9NQA5 729 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 SEMA4GQ9NTN9 838 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 UXTQ9UBK9 157 aaPredicted RBP12.15□□□□□ -0.46
CTTN-209ENST00000525276 HMGXB4Q9UGU5 601 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 GMEB2Q9UKD1 530 aa12.15□□□□□ -0.46
CTTN-209ENST00000525276 MAGED2Q9UNF1 606 aaPredicted RBP12.15□□□□□ -0.46
CTTN-209ENST00000525276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTTN-209ENST00000525276 SPAG17Q6Q759 2223 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 GREB1Q4ZG55 1949 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 CLDN5O00501 218 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 CILPO75339 1184 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 AFPP02771 609 aaKnown RBP12.14□□□□□ -0.47
CTTN-209ENST00000525276 RETP07949 1114 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 VIPR2P41587 438 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 KCNH2Q12809 1159 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 ORC1Q13415 861 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 CCDC183Q5T5S1 534 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 GPR158Q5T848 1215 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 PRR23CQ6ZRP0 262 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 FAM35AQ86V20 835 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 SMARCD2Q92925 531 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 TATDN2Q93075 761 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 TRMT2BQ96GJ1 504 aaKnown RBP12.14□□□□□ -0.47
CTTN-209ENST00000525276 C8orf48Q96LL4 319 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 MYRFLQ96LU7 910 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 THAP9Q9H5L6 903 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 FAM124BQ9H5Z6 455 aaPredicted RBP12.14□□□□□ -0.47
CTTN-209ENST00000525276 EHD2Q9NZN4 543 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 MRPS17Q9Y2R5 130 aaKnown RBP12.14□□□□□ -0.47
CTTN-209ENST00000525276 PIAS3Q9Y6X2 628 aa12.14□□□□□ -0.47
CTTN-209ENST00000525276 FASNP49327 2511 aaKnown RBP12.13□□□□□ -0.47
CTTN-209ENST00000525276 F8VP50 259 aa12.13□□□□□ -0.47
CTTN-209ENST00000525276 MAN2B1O00754 1011 aa12.13□□□□□ -0.47
CTTN-209ENST00000525276 TM4SF5O14894 197 aa12.13□□□□□ -0.47
CTTN-209ENST00000525276 TBXAS1P24557 533 aaPredicted RBP12.13□□□□□ -0.47
CTTN-209ENST00000525276 NRLP54845 237 aa12.13□□□□□ -0.47
CTTN-209ENST00000525276 YWHAEP62258 255 aaKnown RBP12.13□□□□□ -0.47
CTTN-209ENST00000525276 CUL2Q13617 745 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms