RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 PRR5-ARHGAP8B1AHC4 643 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 F8VP50 259 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 CLDN5O00501 218 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 TACC1O75410 805 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 KRT37O76014 449 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 CKMP06732 381 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 USP17L7P0C7H9 530 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 CHRM1P11229 460 aaPredicted RBP10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 TCF3P15923 654 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 TNNI1P19237 187 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 CNR2P34972 360 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 MYL6P60660 151 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 ARHGAP8P85298 464 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 GRSF1Q12849 480 aaKnown RBP eCLIP10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 PDGFRLQ15198 375 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 MDH1BQ5I0G3 518 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 VSTM1Q6UX27 236 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 C4orf50Q6ZRC1 276 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 PRR23CQ6ZRP0 262 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 GUF1Q8N442 669 aaKnown RBP10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 XXYLT1Q8NBI6 393 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 TTC16Q8NEE8 873 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 GOLGA5Q8TBA6 731 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 MYCBPAPQ8TBZ2 947 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 MMS19Q96T76 1030 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 P2RY13Q9BPV8 354 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 ZNF518BQ9C0D4 1074 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 KIAA1586Q9HCI6 787 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 RXFP3Q9NSD7 469 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 DUS2Q9NX74 493 aaKnown RBP10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 CDV3Q9UKY7 258 aaKnown RBP10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 RAB23Q9ULC3 237 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 ARHGAP26Q9UNA1 814 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 CHD6Q8TD26 2715 aa10.28□□□□□ -0.76
CNKSR1-209ENST00000524529 CFAP47Q6ZTR5 3102 aa10.27□□□□□ -0.76
CNKSR1-209ENST00000524529 ZNF840PA6NDX5 716 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 SCAMP3O14828 347 aaKnown RBP10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 LRP3O75074 770 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 LETM1O95202 739 aaPredicted RBP10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 OLFM2O95897 454 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 PTPN1P18031 435 aaKnown RBP10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 HDCP19113 662 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 GNL1P36915 607 aaPredicted RBP10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 GRIK1P39086 918 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 OPRD1P41143 372 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 RAP1GAPP47736 663 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 CDH8P55286 799 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 CYP27A1Q02318 531 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 MESP2Q0VG99 397 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 STIM1Q13586 685 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 MORC3Q14149 939 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 CCDC6Q16204 474 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 CSRP2Q16527 193 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 KNOP1Q1ED39 458 aaKnown RBP10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 WDR72Q3MJ13 1102 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 CCDC183Q5T5S1 534 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 TDRD10Q5VZ19 366 aaKnown RBP10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 CC2D1AQ6P1N0 951 aaPredicted RBP10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 DENND5BQ6ZUT9 1274 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 PAQR9Q6ZVX9 377 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 HS2ST1Q7LGA3 356 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 KBTBD6Q86V97 674 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 SFTPA1Q8IWL2 248 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 C12orf56Q8IXR9 622 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 SMYD4Q8IYR2 804 aaPredicted RBP10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 OR6B3Q8NGW1 331 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 RPLP0P6Q8NHW5 317 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 TMEM174Q8WUU8 243 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 GAB3Q8WWW8 586 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 CD101Q93033 1021 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 CNTNAP3BQ96NU0 1288 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 HHIPQ96QV1 700 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 B3GNT5Q9BYG0 378 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 CNTNAP3Q9BZ76 1288 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 SDCBP2Q9H190 292 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 KCTD10Q9H3F6 313 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 SMYD3Q9H7B4 428 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 LAMA1P25391 3075 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 CEP192Q8TEP8 1941 aa10.27□□□□□ -0.77
CNKSR1-209ENST00000524529 ASCC3Q8N3C0 2202 aaKnown RBP10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 TNRC6BQ9UPQ9 1833 aaKnown RBP10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 CCDC163A0A0D9SF12 145 aa10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 LRRIQ3A6PVS8 624 aaPredicted RBP10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 LEFTY2O00292 366 aa10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 PDXKO00764 312 aa10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 SLC30A4O14863 429 aa10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 AXIN1O15169 862 aa10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 VNN1O95497 513 aa10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 STAU1O95793 577 aaKnown RBP10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 OAS1P00973 400 aaKnown RBP10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 C4BPAP04003 597 aaKnown RBP10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 DRD1P21728 446 aa10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 IFNAR2P48551 515 aa10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 NOP14P78316 857 aaKnown RBP10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 DLG4P78352 724 aa10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 SLC7A9P82251 487 aa10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 TAF10Q12962 218 aa10.26□□□□□ -0.77
CNKSR1-209ENST00000524529 SF3A2Q15428 464 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms