RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 TNFRSF10BO14763 440 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 GADD45BO75293 160 aaPredicted RBP18.29■□□□□ 0.52
CCNC-213ENST00000523541 CILPO75339 1184 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 GNA14O95837 355 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 LMNAP02545 664 aaKnown RBP18.29■□□□□ 0.52
CCNC-213ENST00000523541 CTHP32929 405 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 ANP32AP39687 249 aaKnown RBP18.29■□□□□ 0.52
CCNC-213ENST00000523541 USP46P62068 366 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 IFRD2Q12894 506 aaPredicted RBP18.29■□□□□ 0.52
CCNC-213ENST00000523541 TAF10Q12962 218 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 MTAPQ13126 283 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 ATRIPQ8WXE1 791 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 CYP2S1Q96SQ9 504 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 CHRDQ9H2X0 955 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 CCL26Q9Y258 94 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 USP34Q70CQ2 3546 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 PPP1R3GB7ZBB8 358 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 AP1G2O75843 785 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 OLFM2O95897 454 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 ABL1P00519 1130 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 CHRNB1P11230 501 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 TUBP50607 506 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 PMS1P54277 932 aaKnown RBP18.28■□□□□ 0.52
CCNC-213ENST00000523541 CACNA2D1P54289 1103 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 TNK2Q07912 1038 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 NR1H3Q13133 447 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 MTF1Q14872 753 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 ZNF77Q15935 545 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 TCERG1LQ5VWI1 586 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 TSSK4Q6SA08 328 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 DDX42Q86XP3 938 aaKnown RBP eCLIP18.28■□□□□ 0.52
CCNC-213ENST00000523541 ARL14EPQ8N8R7 260 aaPredicted RBP18.28■□□□□ 0.52
CCNC-213ENST00000523541 SLC2A14Q8TDB8 520 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 OSCP1Q8WVF1 389 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 ERCC4Q92889 916 aaPredicted RBP18.28■□□□□ 0.52
CCNC-213ENST00000523541 CYFIP2Q96F07 1278 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 EEF2KMTQ96G04 330 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 KCNK16Q96T55 309 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 MMRN2Q9H8L6 949 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 TMEM30AQ9NV96 361 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 DMDP11532 3685 aa18.28■□□□□ 0.52
CCNC-213ENST00000523541 C2orf78A6NCI8 922 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 P4HA2O15460 535 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 FGFR1OPO95684 399 aaKnown RBP18.27■□□□□ 0.52
CCNC-213ENST00000523541 OAS1P00973 400 aaKnown RBP18.27■□□□□ 0.52
CCNC-213ENST00000523541 FAM200BP0CF97 657 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 CETN1Q12798 172 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 USP4Q13107 963 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 PON2Q15165 354 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 MAML2Q8IZL2 1156 aaPredicted RBP18.27■□□□□ 0.52
CCNC-213ENST00000523541 SEMA4DQ92854 862 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 ATP2A3Q93084 1043 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 FBXO32Q969P5 355 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 SLC35C1Q96A29 364 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 ELMO3Q96BJ8 720 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 SLC22A12Q96S37 553 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 UBXN6Q9BZV1 441 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 DUS2Q9NX74 493 aaKnown RBP18.27■□□□□ 0.52
CCNC-213ENST00000523541 KIAA1468Q9P260 1216 aa18.27■□□□□ 0.52
CCNC-213ENST00000523541 VPS13AQ96RL7 3174 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 ZNF638Q14966 1978 aaKnown RBP18.26■□□□□ 0.51
CCNC-213ENST00000523541 TRDMT1O14717 391 aaKnown RBP18.26■□□□□ 0.51
CCNC-213ENST00000523541 SLC9A3R1O14745 358 aaPredicted RBP18.26■□□□□ 0.51
CCNC-213ENST00000523541 ZDHHC11BP0C7U3 371 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 BMP6P22004 513 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 CCR3P51677 355 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 SLC5A3P53794 718 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 NRLP54845 237 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 YWHAEP62258 255 aaKnown RBP18.26■□□□□ 0.51
CCNC-213ENST00000523541 DCAF17Q5H9S7 520 aaPredicted RBP18.26■□□□□ 0.51
CCNC-213ENST00000523541 TRIM68Q6AZZ1 485 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 TTI2Q6NXR4 508 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 SPEM1Q8N4L4 309 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 CPA6Q8N4T0 437 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 C12orf29Q8N999 325 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 SH3RF2Q8TEC5 729 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 WHAMMQ8TF30 809 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 SMOQ99835 787 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 DUSP9Q99956 384 aaKnown RBP18.26■□□□□ 0.51
CCNC-213ENST00000523541 EBF3Q9H4W6 596 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 HPS4Q9NQG7 708 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.26■□□□□ 0.513e-11■■■■■ 99.4
CCNC-213ENST00000523541 KRT82Q9NSB4 513 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 COL4A2P08572 1712 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 PATJQ8NI35 1801 aa18.26■□□□□ 0.51
CCNC-213ENST00000523541 PTPRDP23468 1912 aa18.25■□□□□ 0.51
CCNC-213ENST00000523541 DENND4CQ5VZ89 1909 aa18.25■□□□□ 0.51
CCNC-213ENST00000523541 TRIM49BA6NDI0 452 aa18.25■□□□□ 0.51
CCNC-213ENST00000523541 CCDC130P13994 396 aa18.25■□□□□ 0.51
CCNC-213ENST00000523541 CD44P16070 742 aaKnown RBP18.25■□□□□ 0.51
CCNC-213ENST00000523541 TBXAS1P24557 533 aaPredicted RBP18.25■□□□□ 0.51
CCNC-213ENST00000523541 IFNAR2P48551 515 aa18.25■□□□□ 0.51
CCNC-213ENST00000523541 MARSP56192 900 aaKnown RBP18.25■□□□□ 0.51
CCNC-213ENST00000523541 CBWD6Q4V339 395 aa18.25■□□□□ 0.51
CCNC-213ENST00000523541 CBWD3Q5JTY5 395 aa18.25■□□□□ 0.51
CCNC-213ENST00000523541 CBWD5Q5RIA9 395 aa18.25■□□□□ 0.51
CCNC-213ENST00000523541 HECTD3Q5T447 861 aa18.25■□□□□ 0.51
CCNC-213ENST00000523541 ISM2Q6H9L7 571 aa18.25■□□□□ 0.51
CCNC-213ENST00000523541 PIAS4Q8N2W9 510 aaPredicted RBP18.25■□□□□ 0.51
CCNC-213ENST00000523541 CCDC26Q8TAB7 109 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms