RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 TMEM31Q5JXX7 168 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 PRSS36Q5K4E3 855 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 ANKRD40Q6AI12 368 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 INTS8Q75QN2 995 aaKnown RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 SV2AQ7L0J3 742 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 TMC8Q8IU68 726 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 IRF2BP1Q8IU81 584 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 DCP1BQ8IZD4 617 aaKnown RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 ELMOD1Q8N336 334 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 RNF10Q8N5U6 811 aaKnown RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 STKLD1Q8NE28 680 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 ST13P5Q8NFI4 369 aaPredicted RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 SPPL2BQ8TCT7 592 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 RSAD2Q8WXG1 361 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 SYN2Q92777 582 aaPredicted RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 FGF13Q92913 245 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 MYLPFQ96A32 169 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 CCDC42Q96M95 316 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 PCMTD1Q96MG8 357 aaPredicted RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 MMS19Q96T76 1030 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 LPIN3Q9BQK8 851 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 ACBD6Q9BR61 282 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 MRPL45Q9BRJ2 306 aaKnown RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 MKNK1Q9BUB5 465 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 C1QTNF1Q9BXJ1 281 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 MFRPQ9BY79 579 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 FAM107BQ9H098 131 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 DEF6Q9H4E7 631 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 MMRN2Q9H8L6 949 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 VRTNQ9H8Y1 702 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 NHEJ1Q9H9Q4 299 aaPredicted RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 ZNF334Q9HCZ1 680 aaPredicted RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 AVENQ9NQS1 362 aaPredicted RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.23□□□□□ -1.252e-6■■■■■ 149.1
SPIDR-218ENST00000522222 ASAH2Q9NR71 780 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.23□□□□□ -1.257e-6■■■■□ 20.5
SPIDR-218ENST00000522222 NXF1Q9UBU9 619 aaKnown RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 GUCA1BQ9UMX6 200 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 SORCS3Q9UPU3 1222 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 SLC27A5Q9Y2P5 690 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 MRPS23Q9Y3D9 190 aaKnown RBP7.23□□□□□ -1.25
SPIDR-218ENST00000522222 NME7Q9Y5B8 376 aa7.23□□□□□ -1.25
SPIDR-218ENST00000522222 MYBPHLA2RUH7 354 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 TMEM221A6NGB7 291 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 ANHXE9PGG2 379 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 M0R296 226 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 CETN3O15182 167 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 ATP2C2O75185 946 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 MOSPD3O75425 235 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 SASH3O75995 380 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 ASS1P00966 412 aaKnown RBP7.22□□□□□ -1.25
SPIDR-218ENST00000522222 HAPLN1P10915 354 aaPredicted RBP7.22□□□□□ -1.25
SPIDR-218ENST00000522222 MYL4P12829 197 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 LAMP2P13473 410 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 GJA1P17302 382 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 PTPN2P17706 415 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 LMO2P25791 158 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 ATICP31939 592 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 ASPAP45381 313 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 ALDH1A3P47895 512 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 MXI1P50539 228 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 NOP14P78316 857 aaKnown RBP7.22□□□□□ -1.25
SPIDR-218ENST00000522222 APBA1Q02410 837 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 ENPEPQ07075 957 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 SMARCB1Q12824 385 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 CASP8Q14790 479 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 VEPH1Q14D04 833 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 NFE2Q16621 373 aaPredicted RBP7.22□□□□□ -1.25
SPIDR-218ENST00000522222 IFI16Q16666 785 aaKnown RBP7.22□□□□□ -1.25
SPIDR-218ENST00000522222 WDR72Q3MJ13 1102 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 VWA3BQ502W6 1294 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 DCAF17Q5H9S7 520 aaPredicted RBP7.22□□□□□ -1.25
SPIDR-218ENST00000522222 ZNF667Q5HYK9 610 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 SPOPLQ6IQ16 392 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 TRIM67Q6ZTA4 783 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 PDZD4Q76G19 769 aaPredicted RBP7.22□□□□□ -1.25
SPIDR-218ENST00000522222 DPH6Q7L8W6 267 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 FMNL3Q8IVF7 1028 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 LEMD2Q8NC56 503 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 SHKBP1Q8TBC3 707 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 TAS1R2Q8TE23 839 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 C2orf15Q8WU43 125 aaKnown RBP7.22□□□□□ -1.25
SPIDR-218ENST00000522222 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.22□□□□□ -1.253e-6■■■■■ 50.8
SPIDR-218ENST00000522222 EDAQ92838 391 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 PSMG2Q969U7 264 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 ASIC4Q96FT7 647 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 ZNF512Q96ME7 567 aaPredicted RBP7.22□□□□□ -1.25
SPIDR-218ENST00000522222 CEP63Q96MT8 703 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 DUSP9Q99956 384 aaKnown RBP7.22□□□□□ -1.25
SPIDR-218ENST00000522222 CRACR2AQ9BSW2 395 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 LRFN3Q9BTN0 628 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 PI4K2AQ9BTU6 479 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 LRRC3Q9BY71 257 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 SDCBP2Q9H190 292 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 SNX25Q9H3E2 840 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 DPEP3Q9H4B8 488 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 KCNK12Q9HB15 430 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 APOBEC3GQ9HC16 384 aaKnown RBP7.22□□□□□ -1.25
SPIDR-218ENST00000522222 TMEM8AQ9HCN3 771 aa7.22□□□□□ -1.25
SPIDR-218ENST00000522222 ABCB6Q9NP58 842 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms