RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CALCOCO1Q9P1Z2 691 aa7.91□□□□□ -1.14
CTNNA1-227ENST00000521387 STK17AQ9UEE5 414 aa7.91□□□□□ -1.14
CTNNA1-227ENST00000521387 SUSD2Q9UGT4 822 aa7.91□□□□□ -1.14
CTNNA1-227ENST00000521387 ZKSCAN5Q9Y2L8 839 aa7.91□□□□□ -1.14
CTNNA1-227ENST00000521387 SLCO1B1Q9Y6L6 691 aa7.91□□□□□ -1.14
CTNNA1-227ENST00000521387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.91□□□□□ -1.14
CTNNA1-227ENST00000521387 ARID2Q68CP9 1835 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 A0A1B0GUA9 196 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 KCNK3O14649 394 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 TBX3O15119 743 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 PPP6R2O75170 966 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 SOAT2O75908 522 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 DDAH1O94760 285 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 ERLIN2O94905 339 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 ZNF202O95125 648 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 CER1O95813 267 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 CYP3A4P08684 503 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 RNF224P0DH78 156 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 GNSP15586 552 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 PFKFB1P16118 471 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 CLK2P49760 499 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 NPEPPSP55786 919 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 MBTD1Q05BQ5 628 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 DUSP4Q13115 394 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 PDGFRLQ15198 375 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 EML3Q32P44 896 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 PLA2G4FQ68DD2 849 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 SHC4Q6S5L8 630 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 CATIPQ7Z7H3 387 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 SRRM1Q8IYB3 904 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 DIS3L2Q8IYB7 885 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 ZCCHC9Q8N567 271 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 TTC9BQ8N6N2 239 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 KCNE4Q8WWG9 221 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 GJA10Q969M2 543 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 PSMG2Q969U7 264 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 ZNF578Q96N58 590 aaPredicted RBP7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 ZNF830Q96NB3 372 aaPredicted RBP7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 CLIC6Q96NY7 704 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 RNF26Q9BY78 433 aaPredicted RBP7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 TRIM6Q9C030 488 aaPredicted RBP7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 LINC00597Q9H2U6 94 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 FOXP1Q9H334 677 aaPredicted RBP7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 UNC45AQ9H3U1 944 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 CD248Q9HCU0 757 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 SEC63Q9UGP8 760 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 HCN2Q9UL51 889 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 MAFFQ9ULX9 164 aa7.9□□□□□ -1.14
CTNNA1-227ENST00000521387 CNTNAP5Q8WYK1 1306 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 LOC100996750A0A140TA64 210 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 FAM237AA0A1B0GTK4 181 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 A0A1B0GVT2 93 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 ZNF500O60304 480 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 CUTAO60888 179 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 S1PR4O95977 384 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 FOSP01100 380 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 OR4Q2P0C623 313 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 CALM1P0DP23 149 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 CALM2P0DP24 149 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 CALM3P0DP25 149 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 MSNP26038 577 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 COL8A1P27658 744 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 GRK6P43250 576 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 SLC6A11P48066 632 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 ACADVLP49748 655 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 ZNF165P49910 485 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 AKAP17AQ02040 695 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 SOX4Q06945 474 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 NR5A1Q13285 461 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 SAFBQ15424 915 aaKnown RBP eCLIP7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 STX1AQ16623 288 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 KIF19Q2TAC6 998 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 CTXN3Q4LDR2 81 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 SLC27A1Q6PCB7 646 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 TMTC3Q6ZXV5 915 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 NOSTRINQ8IVI9 506 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 HACE1Q8IYU2 909 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 CPA6Q8N4T0 437 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 CCDC26Q8TAB7 109 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 PGLYRP2Q96PD5 576 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 PPP1R10Q96QC0 940 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 SEMA3CQ99985 751 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 KRTAP4-6Q9BYQ5 205 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 DHX33Q9H6R0 707 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 RIC8AQ9NPQ8 531 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 RBM28Q9NW13 759 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 VPS54Q9P1Q0 977 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 CYP8B1Q9UNU6 501 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 HPSEQ9Y251 543 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 SLC27A5Q9Y2P5 690 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 WNT6Q9Y6F9 365 aa7.89□□□□□ -1.15
CTNNA1-227ENST00000521387 A0A1W2PQF6 199 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 ENC1O14682 589 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 SYN3O14994 580 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 CHMP2AO43633 222 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 PCDHGA12O60330 932 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 RFPL3O75679 317 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 FAM87AP0C7U9 286 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 NDUFV2P19404 249 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 ZNF75DP51815 510 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms