RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 LAIR1Q6GTX8 287 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 PKN3Q6P5Z2 889 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 DGLUCYQ7Z3D6 616 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 FAM186BQ8IYM0 893 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 GPR161Q8N6U8 529 aaKnown RBP17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 PDZD8Q8NEN9 1154 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 RPLP0P6Q8NHW5 317 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 TMC2Q8TDI7 906 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 NELL1Q92832 810 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 KCNK16Q96T55 309 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 SDCBP2Q9H190 292 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 DMAC2Q9NW81 257 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 CFAP97Q9P2B7 532 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 CACNA1IQ9P0X4 2223 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 ZNF840PA6NDX5 716 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 K7ESF4 209 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 TRDMT1O14717 391 aaKnown RBP17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 RHOBTB3O94955 611 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 ZNF202O95125 648 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 IRF1P10914 325 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 CD58P19256 250 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 HOXC13P31276 330 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 GCLMP48507 274 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 NDST1P52848 882 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 SLC5A3P53794 718 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 DPYDQ12882 1025 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 RSPO4Q2I0M5 234 aaPredicted RBP17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 EML3Q32P44 896 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 MAMSTRQ6ZN01 415 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 SV2AQ7L0J3 742 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 FILIP1Q7Z7B0 1213 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 TTC30AQ86WT1 665 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 SLC2A14Q8TDB8 520 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 HHIPQ96QV1 700 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 TTLL2Q9BWV7 592 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 DNAI2Q9GZS0 605 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 LINC00597Q9H2U6 94 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 CDV3Q9UKY7 258 aaKnown RBP17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 SH3BP1Q9Y3L3 701 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 USP34Q70CQ2 3546 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 FANCMQ8IYD8 2048 aa17.13■□□□□ 0.33
IGHV3-42-201ENST00000520410 DENND4CQ5VZ89 1909 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 A0A1W2PQ27 194 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 A0A1W2PQ64 194 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 A0A1W2PQD8 194 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 PSMC2P35998 433 aaKnown RBP17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 MAP3K7CLP57077 242 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 ADAM9Q13443 819 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 ZACNQ401N2 412 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 INTS8Q75QN2 995 aaKnown RBP17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 SMYD4Q8IYR2 804 aaPredicted RBP17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 TAF4BQ92750 862 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 RNF38Q9H0F5 515 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 VRTNQ9H8Y1 702 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 FBRSL1Q9HCM7 1045 aaKnown RBP17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 TMEM30AQ9NV96 361 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 HMGXB4Q9UGU5 601 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 CHORDC1Q9UHD1 332 aaPredicted RBP17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 TRAF3IP3Q9Y228 551 aa17.12■□□□□ 0.33
IGHV3-42-201ENST00000520410 SLC9A3R1O14745 358 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 HRO43593 1189 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 AKAP3O75969 853 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 PFKLP17858 780 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 KCNA4P22459 653 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 CNR2P34972 360 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 LMNB2Q03252 620 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 PNOCQ13519 176 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 FBXO43Q4G163 708 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 TCERG1LQ5VWI1 586 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 WDR5BQ86VZ2 330 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 DDX42Q86XP3 938 aaKnown RBP eCLIP17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 SCAMP5Q8TAC9 235 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 ACDQ96AP0 544 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 EEF2KMTQ96G04 330 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 POLR3BQ9NW08 1133 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 GMIPQ9P107 970 aa17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 CIZ1Q9ULV3 898 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-42-201ENST00000520410 IKBKBO14920 756 aa17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 RPP40O75818 363 aaKnown RBP17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 PAPSS2O95340 614 aaPredicted RBP17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 FAM200BP0CF97 657 aa17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 EPB41P11171 864 aaKnown RBP17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 CLDN10P78369 228 aa17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 SLC7A9P82251 487 aa17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 FOXK2Q01167 660 aa17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 KDSRQ06136 332 aa17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 PUM1Q14671 1186 aaKnown RBP eCLIP17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 DCAF17Q5H9S7 520 aaPredicted RBP17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 HECTD3Q5T447 861 aa17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 ERMP1Q7Z2K6 904 aa17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 GUF1Q8N442 669 aaKnown RBP17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 C12orf29Q8N999 325 aa17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 TSG101Q99816 390 aa17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 RMND1Q9NWS8 449 aa17.1■□□□□ 0.33
IGHV3-42-201ENST00000520410 MYO15AQ9UKN7 3530 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 AXIN1O15169 862 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 ADH1CP00326 375 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 ASS1P00966 412 aaKnown RBP17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 OAS1P00973 400 aaKnown RBP17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 CYP17A1P05093 508 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms