RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 TRIM9Q9C026 710 aa16.75■□□□□ 0.27
CSGALNACT1-208ENST00000520003 CRTAC1Q9NQ79 661 aa16.75■□□□□ 0.27
CSGALNACT1-208ENST00000520003 ZNF233A6NK53 670 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 TNFRSF10BO14763 440 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 STX6O43752 255 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 LMO2P25791 158 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 KIR2DL1P43626 348 aaPredicted RBP16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 DHPSP49366 369 aaPredicted RBP16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 PSMC1P62191 440 aaKnown RBP16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 MYO1EQ12965 1108 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 SURF1Q15526 300 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 PEAR1Q5VY43 1037 aaPredicted RBP16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 DENND5BQ6ZUT9 1274 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 EPM2AIP1Q7L775 607 aaPredicted RBP16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 DEFB124Q8NES8 71 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 PIGKQ92643 395 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 MYLPFQ96A32 169 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 HPDLQ96IR7 371 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 RNF38Q9H0F5 515 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 TMEM74BQ9NUR3 256 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 HSPBP1Q9NZL4 362 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 MAGEC2Q9UBF1 373 aaPredicted RBP16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 CDH9Q9ULB4 789 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 NME7Q9Y5B8 376 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 AKAP13Q12802 2813 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 THADAQ6YHU6 1953 aa16.74■□□□□ 0.27
CSGALNACT1-208ENST00000520003 ZNF840PA6NDX5 716 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 SRRM3A6NNA2 597 aaPredicted RBP16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 SGK1O00141 431 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 EIF3DO15371 548 aaKnown RBP eCLIP16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 TGFB1I1O43294 461 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 PPP6R2O75170 966 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 OAS1P00973 400 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 HOXB3P14651 431 aaPredicted RBP16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 WARSP23381 471 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 BDNFP23560 247 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 NOP14P78316 857 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 LMAN2Q12907 356 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 STK38Q15208 465 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 DHCR24Q15392 516 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 MAP7D1Q3KQU3 841 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 TRIM61Q5EBN2 209 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 SPDYCQ5MJ68 293 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 CNNM4Q6P4Q7 775 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 STXBP4Q6ZWJ1 553 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 FILIP1Q7Z7B0 1213 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 PIP4P1Q86T03 277 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 SYT12Q8IV01 421 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 WDR49Q8IV35 697 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 ALLCQ8N6M5 410 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 ZNF507Q8TCN5 953 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 RLN3Q8WXF3 142 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 FOXD4L1Q9NU39 408 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 TRPM5Q9NZQ8 1165 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 MBD1Q9UIS9 605 aaPredicted RBP16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 PKD1L2Q7Z442 2459 aa16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 ASCC3Q8N3C0 2202 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-208ENST00000520003 UPK3BL1B0FP48 263 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 UPK3BL2E5RIL1 263 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 SPTLC2O15270 562 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 ADAM23O75077 832 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 ALDH1A2O94788 518 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 TNNC2P02585 160 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 PTGER3P43115 390 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 SLC6A11P48066 632 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 PPP3CCP48454 512 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 EHHADHQ08426 723 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 COL9A2Q14055 689 aaPredicted RBP16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 MAPRE1Q15691 268 aaKnown RBP16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 DUOXA2Q1HG44 320 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 SLC23A3Q6PIS1 610 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 RHBDF2Q6PJF5 856 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 LPCAT2Q7L5N7 544 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 TRAPPC11Q7Z392 1133 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 C12orf40Q86WS4 652 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 PHTF2Q8N3S3 785 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 FRMD1Q8N878 549 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 TXNDC5Q8NBS9 432 aaKnown RBP16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 WHAMMQ8TF30 809 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 PCED1BQ96HM7 432 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 PNKPQ96T60 521 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 LRRC27Q9C0I9 530 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 GZF1Q9H116 711 aaPredicted RBP16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 CUEDC2Q9H467 287 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 KIAA1586Q9HCI6 787 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 NEUROG3Q9Y4Z2 214 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 CPQQ9Y646 472 aa16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 TNRC6BQ9UPQ9 1833 aaKnown RBP16.72■□□□□ 0.27
CSGALNACT1-208ENST00000520003 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.71■□□□□ 0.27
CSGALNACT1-208ENST00000520003 SLC9A3R1O14745 358 aaPredicted RBP16.71■□□□□ 0.27
CSGALNACT1-208ENST00000520003 KAT7O95251 611 aa16.71■□□□□ 0.27
CSGALNACT1-208ENST00000520003 KLF8O95600 359 aaPredicted RBP16.71■□□□□ 0.27
CSGALNACT1-208ENST00000520003 CST3P01034 146 aaPredicted RBP16.71■□□□□ 0.27
CSGALNACT1-208ENST00000520003 HOXD12P35452 270 aa16.71■□□□□ 0.27
CSGALNACT1-208ENST00000520003 GRIK1P39086 918 aa16.71■□□□□ 0.27
CSGALNACT1-208ENST00000520003 SEMA3BQ13214 749 aa16.71■□□□□ 0.27
CSGALNACT1-208ENST00000520003 UAP1L1Q3KQV9 507 aa16.71■□□□□ 0.27
CSGALNACT1-208ENST00000520003 EMC10Q5UCC4 262 aa16.71■□□□□ 0.27
CSGALNACT1-208ENST00000520003 SHC4Q6S5L8 630 aa16.71■□□□□ 0.27
CSGALNACT1-208ENST00000520003 TMEFF1Q8IYR6 380 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms