RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ACSF2Q96CM8 615 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-206ENST00000519115 TCEAL4Q96EI5 215 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 PKMYT1Q99640 499 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 ACBD6Q9BR61 282 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 DPEP3Q9H4B8 488 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 APOBEC3GQ9HC16 384 aaKnown RBP8.05□□□□□ -1.12
SDCBP-206ENST00000519115 UBE2TQ9NPD8 197 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-206ENST00000519115 ARHGAP20Q9P2F6 1191 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 LIMD1Q9UGP4 676 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 HMGXB4Q9UGU5 601 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 MAFFQ9ULX9 164 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 USTQ9Y2C2 406 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 PPP2R2CQ9Y2T4 447 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 MRPS23Q9Y3D9 190 aaKnown RBP8.05□□□□□ -1.12
SDCBP-206ENST00000519115 PCDHB5Q9Y5E4 795 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 MUC3AQ02505 3323 aa8.05□□□□□ -1.12
SDCBP-206ENST00000519115 HELZP42694 1942 aaKnown RBP8.05□□□□□ -1.12
SDCBP-206ENST00000519115 A8MXQ7 604 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 FOXN3O00409 490 aaPredicted RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 EPHB6O15197 1021 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 DCXO43602 365 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 KRT86O43790 486 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 TACC1O75410 805 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 HAPLN1P10915 354 aaPredicted RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 PTPN2P17706 415 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 CD58P19256 250 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 BDNFP23560 247 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 CYP2F1P24903 491 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 CCR2P41597 374 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 EPHB3P54753 998 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 CYP27A1Q02318 531 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 PLD1Q13393 1074 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 DRAP1Q14919 205 aaPredicted RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 VEPH1Q14D04 833 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 ASIC2Q16515 512 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 NFE2Q16621 373 aaPredicted RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 IFI16Q16666 785 aaKnown RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 TRIM72Q6ZMU5 477 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 NYAP1Q6ZVC0 841 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 PDZD4Q76G19 769 aaPredicted RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 SPATA2LQ8IUW3 424 aaPredicted RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 SCN4BQ8IWT1 228 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 NPAS3Q8IXF0 933 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 ZDHHC14Q8IZN3 488 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 EFCAB3Q8N7B9 438 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 SPPL2BQ8TCT7 592 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 GIPC2Q8TF65 315 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 C2orf15Q8WU43 125 aaKnown RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 RSAD2Q8WXG1 361 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 FGF13Q92913 245 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 VCPIP1Q96JH7 1222 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 ZNF512Q96ME7 567 aaPredicted RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 ZNF830Q96NB3 372 aaPredicted RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 ARID3AQ99856 593 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 SYT11Q9BT88 431 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 BCO2Q9BYV7 579 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 ZNF518BQ9C0D4 1074 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 NIF3L1Q9GZT8 377 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 SMOC2Q9H3U7 446 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 EPHX3Q9H6B9 360 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 ZNF334Q9HCZ1 680 aaPredicted RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 ASAH2Q9NR71 780 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 CDH9Q9ULB4 789 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 PAXBP1Q9Y5B6 917 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 FHOD1Q9Y613 1164 aa8.04□□□□□ -1.12
SDCBP-206ENST00000519115 KIF26AQ9ULI4 1882 aaPredicted RBP8.04□□□□□ -1.12
SDCBP-206ENST00000519115 TICRRQ7Z2Z1 1910 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 ZDBF2Q9HCK1 2354 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 A0A0A6YYK5 440 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-206ENST00000519115 FAM86C2PA6NEL3 165 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 CLDN5O00501 218 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 AKR1B10O60218 316 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 PAEPP09466 180 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 LAMP2P13473 410 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 PTPN1P18031 435 aaKnown RBP8.03□□□□□ -1.12
SDCBP-206ENST00000519115 EIF4A3P38919 411 aaKnown RBP8.03□□□□□ -1.12
SDCBP-206ENST00000519115 TUFMP49411 452 aaKnown RBP8.03□□□□□ -1.12
SDCBP-206ENST00000519115 KLK7P49862 253 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 NDST1P52848 882 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 ETF1P62495 437 aaKnown RBP8.03□□□□□ -1.12
SDCBP-206ENST00000519115 TUBB4BP68371 445 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 PTK2Q05397 1052 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 SMARCB1Q12824 385 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 MTMR3Q13615 1198 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 CUL2Q13617 745 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 STILQ15468 1287 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 TAF12Q16514 161 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 PTPN21Q16825 1174 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 DDR2Q16832 855 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 PRSS36Q5K4E3 855 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 CYP4A22Q5TCH4 519 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 FAM171BQ6P995 826 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 RAD9BQ6WBX8 426 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 C4orf50Q6ZRC1 276 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 DNAJB7Q7Z6W7 309 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-206ENST00000519115 ACOT1Q86TX2 421 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 TMC8Q8IU68 726 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 REXO1L1PQ8IX06 675 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 UBR7Q8N806 425 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 B3GALNT2Q8NCR0 500 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms