RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 SMIM22K7EJ46 135 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 RRP9O43818 475 aaKnown RBP4.53□□□□□ -1.68
SKP1-205ENST00000519054 PQBP1O60828 265 aaKnown RBP4.53□□□□□ -1.68
SKP1-205ENST00000519054 PDE8BO95263 885 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 TXNP10599 105 aaKnown RBP4.53□□□□□ -1.68
SKP1-205ENST00000519054 PRKAR1BP31321 381 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 BCAT1P54687 386 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 CYP4F2P78329 520 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 CCNIQ14094 377 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 ARHGEF7Q14155 803 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 SLC29A2Q14542 456 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 SUMO4Q6EEV6 95 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 UNC13DQ70J99 1090 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 ZNF804AQ7Z570 1209 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 RP9Q8TA86 221 aaKnown RBP4.53□□□□□ -1.68
SKP1-205ENST00000519054 TTC17Q96AE7 1141 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 REPS1Q96D71 796 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 FSD1LQ9BXM9 530 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 NUP62CLQ9H1M0 184 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 CORO2BQ9UQ03 480 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 FAM50BQ9Y247 325 aa4.53□□□□□ -1.68
SKP1-205ENST00000519054 AP4M1O00189 453 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 CCP110O43303 1012 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 PIAS2O75928 621 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 JTBO76095 146 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 HGFP14210 728 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 ACVR2AP27037 513 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 CARSP49589 748 aaKnown RBP4.52□□□□□ -1.69
SKP1-205ENST00000519054 E2F1Q01094 437 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 STK3Q13188 491 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 NPY5RQ15761 445 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 CYP1B1Q16678 543 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 L1TD1Q5T7N2 865 aaKnown RBP4.52□□□□□ -1.69
SKP1-205ENST00000519054 YAF2Q8IY57 180 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 ABHD11Q8NFV4 315 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 HASPINQ8TF76 798 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 ZBTB45Q96K62 511 aaPredicted RBP4.52□□□□□ -1.69
SKP1-205ENST00000519054 MSLNLQ96KJ4 702 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 LENG8Q96PV6 779 aaPredicted RBP4.52□□□□□ -1.69
SKP1-205ENST00000519054 TRIM5Q9C035 493 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 BTBD1Q9H0C5 482 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 DDX21Q9NR30 783 aaKnown RBP eCLIP4.52□□□□□ -1.69
SKP1-205ENST00000519054 GABRQQ9UN88 632 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 DRG1Q9Y295 367 aaKnown RBP4.52□□□□□ -1.69
SKP1-205ENST00000519054 FRMD4BQ9Y2L6 1034 aa4.52□□□□□ -1.69
SKP1-205ENST00000519054 RHPN2P1A8MT19 583 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 PSMD9O00233 223 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 CD3EAPO15446 510 aaKnown RBP4.51□□□□□ -1.69
SKP1-205ENST00000519054 MT-ND5P03915 603 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 PRKCBP05771 671 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 DLDP09622 509 aaKnown RBP4.51□□□□□ -1.69
SKP1-205ENST00000519054 NHLRC4P0CG21 123 aaPredicted RBP4.51□□□□□ -1.69
SKP1-205ENST00000519054 TPH1P17752 444 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 EPHA3P29320 983 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 UQCRC1P31930 480 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 MTHFSP49914 203 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 CPT1AP50416 773 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 TFF2Q03403 129 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 ZNF750Q32MQ0 723 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 TBC1D25Q3MII6 688 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 COLEC12Q5KU26 742 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 FCRL6Q6DN72 434 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 PTF1AQ7RTS3 328 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 KRT78Q8N1N4 520 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 CYP2W1Q8TAV3 490 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 DDB2Q92466 427 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 DPF1Q92782 380 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 PHKBQ93100 1093 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 SNX22Q96L94 193 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 C8orf48Q96LL4 319 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 PRR25Q96S07 402 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 TBC1D23Q9NUY8 699 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 ZNF212Q9UDV6 495 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 USP22Q9UPT9 525 aa4.51□□□□□ -1.69
SKP1-205ENST00000519054 WIPF3A6NGB9 483 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 LINC01548A6NM66 108 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 EXOC3O60645 756 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 TJP3O95049 919 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 PRKCGP05129 697 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 RPL17P18621 184 aaKnown RBP4.5□□□□□ -1.69
SKP1-205ENST00000519054 BTF3P20290 206 aaKnown RBP4.5□□□□□ -1.69
SKP1-205ENST00000519054 FPR3P25089 353 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 IL1R2P27930 398 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 PIK3CBP42338 1070 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 PGDP52209 483 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 KCNAB1Q14722 419 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 PROSER3Q2NL68 480 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 COBLL1Q53SF7 1204 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 ZNF782Q6ZMW2 699 aaPredicted RBP4.5□□□□□ -1.69
SKP1-205ENST00000519054 CCAR1Q8IX12 1150 aaKnown RBP4.5□□□□□ -1.69
SKP1-205ENST00000519054 SIRT6Q8N6T7 355 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 SMCR8Q8TEV9 937 aaPredicted RBP4.5□□□□□ -1.69
SKP1-205ENST00000519054 IPCEF1Q8WWN9 437 aaPredicted RBP4.5□□□□□ -1.69
SKP1-205ENST00000519054 VOPP1Q96AW1 172 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 STRBPQ96SI9 672 aaKnown RBP4.5□□□□□ -1.69
SKP1-205ENST00000519054 BRIP1Q9BX63 1249 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 VN1R3Q9BXE9 311 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 UNKQ9C0B0 810 aaKnown RBP4.5□□□□□ -1.69
SKP1-205ENST00000519054 DHX36Q9H2U1 1008 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms