RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 SPATA32Q96LK8 384 aa6.61□□□□□ -1.35
PABPC1-207ENST00000518716 PPP1R10Q96QC0 940 aaKnown RBP6.61□□□□□ -1.35
PABPC1-207ENST00000518716 LRRC3Q9BY71 257 aa6.61□□□□□ -1.35
PABPC1-207ENST00000518716 ARRDC1-AS1Q9H2J1 176 aa6.61□□□□□ -1.35
PABPC1-207ENST00000518716 RBM12Q9NTZ6 932 aaKnown RBP6.61□□□□□ -1.35
PABPC1-207ENST00000518716 PARP2Q9UGN5 583 aa6.61□□□□□ -1.35
PABPC1-207ENST00000518716 DDX25Q9UHL0 483 aaKnown RBP6.61□□□□□ -1.35
PABPC1-207ENST00000518716 PCDHGA5Q9Y5G8 931 aa6.61□□□□□ -1.35
PABPC1-207ENST00000518716 GCN1Q92616 2671 aaKnown RBP6.61□□□□□ -1.35
PABPC1-207ENST00000518716 ATG2BQ96BY7 2078 aa6.61□□□□□ -1.35
PABPC1-207ENST00000518716 LAMA1P25391 3075 aa6.61□□□□□ -1.35
PABPC1-207ENST00000518716 MAST4O15021 2626 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 TMEM8BA6NDV4 472 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 ZNF197O14709 1029 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 GIPC1O14908 333 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 TBX3O15119 743 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 CHADO15335 359 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 EXTL3O43909 919 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 RECQL4O94761 1208 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 VNN2O95498 520 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 KRT1P04264 644 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 EDN1P05305 212 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 CPA1P15085 419 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 TKTP29401 623 aaKnown RBP6.6□□□□□ -1.35
PABPC1-207ENST00000518716 SOX9P48436 509 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 NCBP1Q09161 790 aaKnown RBP6.6□□□□□ -1.35
PABPC1-207ENST00000518716 TFDP1Q14186 410 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 XKR9Q5GH70 373 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 XKR4Q5GH76 650 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 DGKKQ5KSL6 1271 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 C1orf228Q6PIY5 440 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 ALKAL1Q6UXT8 129 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 ANKS3Q6ZW76 656 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 SND1Q7KZF4 910 aaKnown RBP eCLIP6.6□□□□□ -1.35
PABPC1-207ENST00000518716 OTUD6AQ7L8S5 288 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 CACNA2D4Q7Z3S7 1137 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 KBTBD6Q86V97 674 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 BLIDQ8IZY5 108 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 SYNPOQ8N3V7 929 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 GAB3Q8WWW8 586 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 CHFRQ96EP1 664 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 LIN37Q96GY3 246 aaPredicted RBP6.6□□□□□ -1.35
PABPC1-207ENST00000518716 DYDC2Q96IM9 177 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 CORO1BQ9BR76 489 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 TRIM6Q9C030 488 aaPredicted RBP6.6□□□□□ -1.35
PABPC1-207ENST00000518716 GSX1Q9H4S2 264 aaPredicted RBP6.6□□□□□ -1.35
PABPC1-207ENST00000518716 PDZD7Q9H5P4 517 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 ZSWIM4Q9H7M6 989 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 ANKEF1Q9NU02 776 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 SNTG2Q9NY99 539 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 FAM53CQ9NYF3 392 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 CEP72Q9P209 647 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 EML5Q05BV3 1969 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 ARID2Q68CP9 1835 aa6.6□□□□□ -1.35
PABPC1-207ENST00000518716 NAV2Q8IVL1 2488 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 ASH1LQ9NR48 2969 aaKnown RBP6.59□□□□□ -1.35
PABPC1-207ENST00000518716 HEPACAM2A8MVW5 462 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 SPECC1L-ADORA2AF8WAN1 911 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 TAF4O00268 1085 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 ZNF263O14978 683 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 ICMTO60725 284 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 AKAP3O75969 853 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 B3GAT3O94766 335 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 TOP3BO95985 862 aaKnown RBP6.59□□□□□ -1.35
PABPC1-207ENST00000518716 XRCC6P12956 609 aaKnown RBP eCLIP6.59□□□□□ -1.35
PABPC1-207ENST00000518716 MPSTP25325 297 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 PDIA3P30101 505 aaKnown RBP6.59□□□□□ -1.35
PABPC1-207ENST00000518716 RARRES1P49788 294 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 CLCNKBP51801 687 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 NLRP5P59047 1200 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 RING1Q06587 406 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 CTTNQ14247 550 aaKnown RBP6.59□□□□□ -1.35
PABPC1-207ENST00000518716 LRRC32Q14392 662 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 KRT32Q14532 448 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 CCDC6Q16204 474 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 INF2Q27J81 1249 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 PLK5Q496M5 336 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 AASDHQ4L235 1098 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-207ENST00000518716 TPGS2Q68CL5 300 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 HEATR6Q6AI08 1181 aaKnown RBP6.59□□□□□ -1.35
PABPC1-207ENST00000518716 GALNT17Q6IS24 598 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 PKN3Q6P5Z2 889 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 RALGPS2Q86X27 583 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-207ENST00000518716 TMC8Q8IU68 726 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 BEST2Q8NFU1 509 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 BRF1Q92994 677 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 E2F7Q96AV8 911 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 SLC26A6Q9BXS9 759 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 CCDC113Q9H0I3 377 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 C8orf33Q9H7E9 229 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-207ENST00000518716 VPS45Q9NRW7 570 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 PRMT7Q9NVM4 692 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-207ENST00000518716 MAFFQ9ULX9 164 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 INSL5Q9Y5Q6 135 aa6.59□□□□□ -1.35
PABPC1-207ENST00000518716 FREM2Q5SZK8 3169 aa6.59□□□□□ -1.36
PABPC1-207ENST00000518716 ITPR1Q14643 2758 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 LOC400499M0QZD8 3231 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 PI4KAP42356 2102 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 FAM221BA6H8Z2 402 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 I3L4J1 428 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms