RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 SMG5Q9UPR3 1016 aaKnown RBP11.23□□□□□ -0.61
SPIDR-205ENST00000518060 CPQQ9Y646 472 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 OTOL1A6NHN0 477 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-205ENST00000518060 CHURC1-FNTBB4DL54 471 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 LEFTY2O00292 366 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 CETN3O15182 167 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 FAM200BP0CF97 657 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 PPP3CCP48454 512 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 FNTBP49356 437 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 MXI1P50539 228 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 MAP3K7CLP57077 242 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 PPP3CAQ08209 521 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 EP300Q09472 2414 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-205ENST00000518060 NR1H3Q13133 447 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 NFIL3Q16649 462 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 C1orf220Q5T0J3 134 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 PDZD8Q8NEN9 1154 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 SCAMP5Q8TAC9 235 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 TMEM174Q8WUU8 243 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 RUBCNQ92622 972 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 P2RY13Q9BPV8 354 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 TTLL2Q9BWV7 592 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 FAM126AQ9BYI3 521 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-205ENST00000518060 DNAI2Q9GZS0 605 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 NIF3L1Q9GZT8 377 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 ECT2Q9H8V3 914 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 APOBEC3GQ9HC16 384 aaKnown RBP11.22□□□□□ -0.61
SPIDR-205ENST00000518060 TMEM8AQ9HCN3 771 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 CACNA1IQ9P0X4 2223 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 CFAP97Q9P2B7 532 aa11.22□□□□□ -0.61
SPIDR-205ENST00000518060 MAPK13O15264 365 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 STX10O60499 249 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 NFATC1O95644 943 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 EGFP01133 1207 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 IRF1P10914 325 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 PRCPP42785 496 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 STIM1Q13586 685 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 CCINQ13939 588 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 GAS6Q14393 721 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 EDRF1Q3B7T1 1238 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 WDR44Q5JSH3 913 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 ZNF658Q5TYW1 1059 aaPredicted RBP11.21□□□□□ -0.61
SPIDR-205ENST00000518060 NAIF1Q69YI7 327 aaPredicted RBP11.21□□□□□ -0.61
SPIDR-205ENST00000518060 KRT39Q6A163 491 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 ISM2Q6H9L7 571 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 FSTL4Q6MZW2 842 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 FILIP1Q7Z7B0 1213 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 UNC93AQ86WB7 457 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 FUKQ8N0W3 1084 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 DCLK2Q8N568 766 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 C12orf29Q8N999 325 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 CHFRQ96EP1 664 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 NT5C1AQ9BXI3 368 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 GMIPQ9P107 970 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 CHORDC1Q9UHD1 332 aaPredicted RBP11.21□□□□□ -0.61
SPIDR-205ENST00000518060 GMEB2Q9UKD1 530 aa11.21□□□□□ -0.61
SPIDR-205ENST00000518060 GPR179Q6PRD1 2367 aa11.21□□□□□ -0.62
SPIDR-205ENST00000518060 PATJQ8NI35 1801 aa11.21□□□□□ -0.62
SPIDR-205ENST00000518060 USP34Q70CQ2 3546 aa11.21□□□□□ -0.62
SPIDR-205ENST00000518060 VPS13AQ96RL7 3174 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 MYO15AQ9UKN7 3530 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 RNF40O75150 1001 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 PFKLP17858 780 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 GJA4P35212 333 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 SLC7A9P82251 487 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 DMWDQ09019 674 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 EML3Q32P44 896 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 ZCWPW2Q504Y3 356 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 ZNF394Q53GI3 561 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 TMEM196Q5HYL7 178 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 HECTD3Q5T447 861 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 PAQR9Q6ZVX9 377 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 CEP68Q76N32 757 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 DDX42Q86XP3 938 aaKnown RBP eCLIP11.2□□□□□ -0.62
SPIDR-205ENST00000518060 SYNPOQ8N3V7 929 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 ZBTB44Q8NCP5 570 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 CD101Q93033 1021 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 GSDMAQ96QA5 445 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 TWNKQ96RR1 684 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 SMOQ99835 787 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 RNF38Q9H0F5 515 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 LINC00597Q9H2U6 94 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 CYP3A43Q9HB55 503 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 C2orf42Q9NWW7 574 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 SLC8A2Q9UPR5 921 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 SH3BP1Q9Y3L3 701 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 PCDHA5Q9Y5H7 936 aa11.2□□□□□ -0.62
SPIDR-205ENST00000518060 TRIM49BA6NDI0 452 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 TRDMT1O14717 391 aaKnown RBP11.19□□□□□ -0.62
SPIDR-205ENST00000518060 SLC9A3R1O14745 358 aaPredicted RBP11.19□□□□□ -0.62
SPIDR-205ENST00000518060 PSMA7O14818 248 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 SLC16A3O15427 465 aaKnown RBP11.19□□□□□ -0.62
SPIDR-205ENST00000518060 COCHO43405 550 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 ATG13O75143 517 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 BEST1O76090 585 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 OAS1P00973 400 aaKnown RBP11.19□□□□□ -0.62
SPIDR-205ENST00000518060 TDGF1P13385 188 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 DRD1P21728 446 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 GTF2H1P32780 548 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms