RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 SGK1O00141 431 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 OLFM2O95897 454 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 ABL1P00519 1130 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 TNNC2P02585 160 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 PDGFRBP09619 1106 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 IDEP14735 1019 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 PTGER3P43115 390 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 MAPK8P45983 427 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 SLC6A11P48066 632 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 NOP14P78316 857 aaKnown RBP16.81■□□□□ 0.28
LMNA-223ENST00000515459 RESTQ13127 1097 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 BYSLQ13895 437 aaKnown RBP16.81■□□□□ 0.28
LMNA-223ENST00000515459 COL9A2Q14055 689 aaPredicted RBP16.81■□□□□ 0.28
LMNA-223ENST00000515459 SPDYCQ5MJ68 293 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 SFTPA1Q8IWL2 248 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 TMEFF1Q8IYR6 380 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 FRMD1Q8N878 549 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 MYCBPAPQ8TBZ2 947 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 PCED1BQ96HM7 432 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 TMEM74BQ9NUR3 256 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 SMPD4Q9NXE4 827 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 CPQQ9Y646 472 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 IGF2RP11717 2491 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 PI4KAP42356 2102 aa16.81■□□□□ 0.28
LMNA-223ENST00000515459 ASPMQ8IZT6 3477 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 A0A0A0MRY4 1105 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 SRRM3A6NNA2 597 aaPredicted RBP16.8■□□□□ 0.28
LMNA-223ENST00000515459 KIAA0391O15091 583 aaKnown RBP16.8■□□□□ 0.28
LMNA-223ENST00000515459 ADH1CP00326 375 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 OAS1P00973 400 aaKnown RBP16.8■□□□□ 0.28
LMNA-223ENST00000515459 ENGP17813 658 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 WARSP23381 471 aaKnown RBP16.8■□□□□ 0.28
LMNA-223ENST00000515459 TXLNAP40222 546 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 GRIA2P42262 883 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 KIR2DL1P43626 348 aaPredicted RBP16.8■□□□□ 0.28
LMNA-223ENST00000515459 MESP2Q0VG99 397 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 SURF1Q15526 300 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 ERICH6BQ5W0A0 696 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 LYSMD4Q5XG99 296 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 KIAA1211LQ6NV74 962 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 SLC23A3Q6PIS1 610 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 RHBDF2Q6PJF5 856 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 DDX42Q86XP3 938 aaKnown RBP eCLIP16.8■□□□□ 0.28
LMNA-223ENST00000515459 PGBD3Q8N328 593 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 OR5B17Q8NGF7 314 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 HMGB4Q8WW32 186 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 ZCCHC14Q8WYQ9 949 aaKnown RBP16.8■□□□□ 0.28
LMNA-223ENST00000515459 C8orf48Q96LL4 319 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 SLITRK1Q96PX8 696 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 MMS19Q96T76 1030 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 ARHGEF4Q9NR80 690 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 CFAP97Q9P2B7 532 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 MBD1Q9UIS9 605 aaPredicted RBP16.8■□□□□ 0.28
LMNA-223ENST00000515459 NEUROG3Q9Y4Z2 214 aa16.8■□□□□ 0.28
LMNA-223ENST00000515459 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.8■□□□□ 0.28
LMNA-223ENST00000515459 PTPRJQ12913 1337 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 ADAMTS9Q9P2N4 1935 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.79■□□□□ 0.28
LMNA-223ENST00000515459 F8VP50 259 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 SCAMP3O14828 347 aaKnown RBP16.79■□□□□ 0.28
LMNA-223ENST00000515459 HYAL3O43820 417 aaPredicted RBP16.79■□□□□ 0.28
LMNA-223ENST00000515459 CHRM1P11229 460 aaPredicted RBP16.79■□□□□ 0.28
LMNA-223ENST00000515459 ADH5P11766 374 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 TNFRSF4P43489 277 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 TAF10Q12962 218 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 DUOXA2Q1HG44 320 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 MAP7D1Q3KQU3 841 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 MDH1BQ5I0G3 518 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 EMC10Q5UCC4 262 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 TDRD10Q5VZ19 366 aaKnown RBP16.79■□□□□ 0.28
LMNA-223ENST00000515459 HS2ST1Q7LGA3 356 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 C12orf40Q86WS4 652 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 FGFBP2Q9BYJ0 223 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 TBC1D14Q9P2M4 693 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 BAHCC1Q9P281 2608 aa16.79■□□□□ 0.28
LMNA-223ENST00000515459 ATXN2Q99700 1313 aaKnown RBP16.78■□□□□ 0.28
LMNA-223ENST00000515459 TCRBV21S2A2A0A5A6 115 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 FRMD3A2A2Y4 597 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 ZNF233A6NK53 670 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 ADAM23O75077 832 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 PRPF6O94906 941 aaKnown RBP16.78■□□□□ 0.28
LMNA-223ENST00000515459 CD2BP2O95400 341 aaKnown RBP16.78■□□□□ 0.28
LMNA-223ENST00000515459 CFIP05156 583 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 MBL2P11226 248 aaPredicted RBP16.78■□□□□ 0.28
LMNA-223ENST00000515459 HOXD12P35452 270 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 GNL1P36915 607 aaPredicted RBP16.78■□□□□ 0.28
LMNA-223ENST00000515459 ATXN3P54252 364 aaPredicted RBP16.78■□□□□ 0.28
LMNA-223ENST00000515459 KDSRQ06136 332 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 PEAR1Q5VY43 1037 aaPredicted RBP16.78■□□□□ 0.28
LMNA-223ENST00000515459 SNX25Q9H3E2 840 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 ZDHHC4Q9NPG8 344 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 PANK4Q9NVE7 773 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 FBXO2Q9UK22 296 aaPredicted RBP16.78■□□□□ 0.28
LMNA-223ENST00000515459 PILRBQ9UKJ0 227 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 MSRB2Q9Y3D2 182 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 SRPRBQ9Y5M8 271 aaKnown RBP16.78■□□□□ 0.28
LMNA-223ENST00000515459 CLIC4Q9Y696 253 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 PCNX2A6NKB5 2137 aa16.78■□□□□ 0.28
LMNA-223ENST00000515459 ATRXP46100 2492 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms