RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 PRDM12Q9H4Q4 367 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 LUC7LQ9NQ29 371 aaKnown RBP13.21□□□□□ -0.29
PDPN-210ENST00000513143 ST7Q9NRC1 585 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 ADAM22Q9P0K1 906 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 INTUQ9ULD6 942 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 YIPF1Q9Y548 306 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 FAM170AA1A519 330 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 E5RJQ4 531 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 PRRG1O14668 218 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 PER2O15055 1255 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 ERBB2P04626 1255 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 TMEM253P0C7T8 217 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 SPATA31D3P0C874 917 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 MYBL1P10243 752 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 ATF6P18850 670 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 GSCP56915 257 aaPredicted RBP13.2□□□□□ -0.3
PDPN-210ENST00000513143 MMS22LQ6ZRQ5 1243 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 SPATA31D4Q6ZUB0 917 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 CCDC149Q6ZUS6 474 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 GPRIN1Q7Z2K8 1008 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 IPO4Q8TEX9 1081 aaKnown RBP13.2□□□□□ -0.3
PDPN-210ENST00000513143 HDAC7Q8WUI4 952 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 TRIM11Q96F44 468 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 LRCH3Q96II8 777 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 CDCA3Q99618 268 aaPredicted RBP13.2□□□□□ -0.3
PDPN-210ENST00000513143 C11orf70Q9BRQ4 267 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 PACSIN1Q9BY11 444 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 MIS12Q9H081 205 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 PLEKHA4Q9H4M7 779 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 NSUN3Q9H649 340 aaKnown RBP13.2□□□□□ -0.3
PDPN-210ENST00000513143 TLE6Q9H808 572 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 LRRC4Q9HBW1 653 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 TJP2Q9UDY2 1190 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 STRIP2Q9ULQ0 834 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 PYCARDQ9ULZ3 195 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 INSL5Q9Y5Q6 135 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 USP3Q9Y6I4 520 aa13.2□□□□□ -0.3
PDPN-210ENST00000513143 CCDC175P0C221 793 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 POU3F3P20264 500 aaPredicted RBP13.19□□□□□ -0.3
PDPN-210ENST00000513143 ALDH1A3P47895 512 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 VAV2P52735 878 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 SLC5A3P53794 718 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 GPC5P78333 572 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 TWF1Q12792 350 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 KCNC3Q14003 757 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 ZNF268Q14587 947 aaPredicted RBP13.19□□□□□ -0.3
PDPN-210ENST00000513143 GRIN2CQ14957 1233 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 C2CD6Q53TS8 623 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 ZNF697Q5TEC3 545 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 SDHAF4Q5VUM1 108 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 RBM23Q86U06 439 aaKnown RBP13.19□□□□□ -0.3
PDPN-210ENST00000513143 XYLT1Q86Y38 959 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 ZDHHC17Q8IUH5 632 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 NUP93Q8N1F7 819 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 SCML4Q8N228 414 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 SLC7A14Q8TBB6 771 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 PPP2R3CQ969Q6 453 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 THAP2Q9H0W7 228 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 SYNCQ9H7C4 482 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 CNGB3Q9NQW8 809 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 COMMD8Q9NX08 183 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 IL37Q9NZH6 218 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 WDR35Q9P2L0 1181 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 DPP7Q9UHL4 492 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 PPP2R2CQ9Y2T4 447 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 HCFC2Q9Y5Z7 792 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 MYO16Q9Y6X6 1858 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 PRRC2BQ5JSZ5 2229 aaKnown RBP13.19□□□□□ -0.3
PDPN-210ENST00000513143 NCANO14594 1321 aa13.19□□□□□ -0.3
PDPN-210ENST00000513143 TCRBV5S1A1TA0A578 114 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 RCCD1A6NED2 376 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 SLC38A8A6NNN8 435 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 PIK3R2O00459 728 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 PJA2O43164 708 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 PAPSS1O43252 624 aaPredicted RBP13.18□□□□□ -0.3
PDPN-210ENST00000513143 FBXO21O94952 628 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 RTN3O95197 1032 aaPredicted RBP13.18□□□□□ -0.3
PDPN-210ENST00000513143 C8AP07357 584 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 LCP1P13796 627 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 EPCAMP16422 314 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 ABCB4P21439 1286 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 RRM1P23921 792 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 NRIP1P48552 1158 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 TKTL1P51854 596 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 EPHB3P54753 998 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 ADIGQ0VDE8 80 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 PLD1Q13393 1074 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 CYP4A22Q5TCH4 519 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 LIN9Q5TKA1 542 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 PM20D1Q6GTS8 502 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 PLEKHA7Q6IQ23 1121 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 ZNF662Q6ZS27 426 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 DENND5BQ6ZUT9 1274 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 KIAA1328Q86T90 577 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 SCUBE3Q8IX30 993 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 SIX6OS1Q8N1H7 587 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 TXLNBQ8N3L3 684 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 SCAMP5Q8TAC9 235 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 GPR152Q8TDT2 470 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms